[Olena-patches] 3372: Add source for command executables.

https://svn.lrde.epita.fr/svn/oln/trunk/milena/sandbox Index: ChangeLog from Thierry Geraud &lt;thierry.geraud(a)lrde.epita.fr&gt; Add source for command executables. * theo/igr/dump2pgm.cc: Move and rename as... * theo/exec/dump2pnm.cc: ...this. Update to also handle pbm and ppm. * theo/igr/pgms2dump.cc: Move and rename as... * theo/exec/pnms2dump.cc: ...this. Update to also handle pbm and ppm. * theo/exec/clean_holes.cc: New. * theo/exec/threshold_low.cc: New. * theo/exec/dump2cloud.cc: New. * theo/exec/closing_area.cc: New. * theo/exec/closing_isotropic.cc: New. clean_holes.cc | 66 +++++++++++++++++++++++++++++++++++++++++++ closing_area.cc | 60 +++++++++++++++++++++++++++++++++++++++ closing_isotropic.cc | 71 +++++++++++++++++++++++++++++++++++++++++++++++ dump2cloud.cc | 34 ++++++++++++++++++++++ dump2pnm.cc | 77 +++++++++++++++++++++++++++++++++++++++++++++------ pnms2dump.cc | 71 +++++++++++++++++++++++++++++++++++++++++++---- threshold_low.cc | 69 +++++++++++++++++++++++++++++++++++++++++++++ 7 files changed, 433 insertions(+), 15 deletions(-) Index: theo/exec/clean_holes.cc --- theo/exec/clean_holes.cc (revision 0) +++ theo/exec/clean_holes.cc (revision 0) @@ -0,0 +1,66 @@ +#include "filetype.hh" + +#include <mln/value/label_16.hh> +#include <mln/labeling/fill_holes.hh> +#include <mln/logical/not.hh> + + + +void usage(char* argv[]) +{ + std::cerr << "usage: " << argv[0] << " input.xxx output.xxx" << std::endl + << " Clean holes." << std::endl + << " xxx is pbm (2D) or dump (3D)." << std::endl; + std::abort(); +} + + + +int main(int argc, char* argv[]) +{ + using namespace mln; + using value::int_u8; + + if (argc != 3) + usage(argv); + + trace::entering("main"); + + std::string filename = argv[1]; + + switch (get_filetype(argv[1])) + { + case filetype::pbm: + { + image2d<bool> ima, out; + io::pbm::load(ima, argv[1]); + value::label_16 n; + out = labeling::fill_holes(ima, c4(), n); + out = labeling::fill_holes(logical::not_(out), c4(), n); + io::pbm::save(out, argv[2]); + } + break; + + case filetype::dump: + { + image3d<bool> ima, out; + io::dump::load(ima, argv[1]); + value::label_16 n; + out = labeling::fill_holes(ima, c6(), n); + out = labeling::fill_holes(logical::not_(out), c6(), n); + io::dump::save(out, argv[2]); + } + break; + + case filetype::unknown: + std::cerr << "unknown filename extension!" << std::endl; + usage(argv); + break; + + default: + std::cerr << "file type not handled!" << std::endl; + usage(argv); + } + + trace::exiting("main"); +} Index: theo/exec/threshold_low.cc --- theo/exec/threshold_low.cc (revision 0) +++ theo/exec/threshold_low.cc (revision 0) @@ -0,0 +1,69 @@ +#include "filetype.hh" + +#include <mln/core/routine/duplicate.hh> +#include <mln/pw/all.hh> + + + +void usage(char* argv[]) +{ + std::cerr << "usage: " << argv[0] << " input.xxx low output.xxx" << std::endl + << " Low threshold." << std::endl + << " xxx is pbm (2D) or dump (3D)." << std::endl; + std::abort(); +} + + + +int main(int argc, char* argv[]) +{ + using namespace mln; + using value::int_u8; + + if (argc != 4) + usage(argv); + + + trace::entering("main"); + + std::string filename = argv[1]; + + int low = std::atoi(argv[2]); + if (low < 0 || low > 255) + { + std::cerr << "bad threshold!" << std::endl; + usage(argv); + } + + + + switch (get_filetype(argv[1])) + { + case filetype::pgm: + { + image2d<int_u8> ima; + io::pgm::load(ima, argv[1]); + io::pbm::save(duplicate((pw::value(ima) < pw::cst(low)) | ima.domain()), argv[3]); + } + break; + + case filetype::dump: + { + image3d<int_u8> ima; + io::dump::load(ima, argv[1]); + io::dump::save(duplicate((pw::value(ima) < pw::cst(low)) | ima.domain()), argv[3]); + } + break; + + case filetype::unknown: + std::cerr << "unknown filename extension!" << std::endl; + usage(argv); + break; + + default: + std::cerr << "file type not handled!" << std::endl; + usage(argv); + } + + trace::exiting("main"); +} Index: theo/exec/dump2cloud.cc --- theo/exec/dump2cloud.cc (revision 0) +++ theo/exec/dump2cloud.cc (revision 0) @@ -0,0 +1,34 @@ +#include "filetype.hh" + +#include <mln/io/cloud/save.hh> + + + +void usage(char* argv[]) +{ + std::cerr << "usage: " << argv[0] << " input.dump output.txt" << std::endl + << " Dump (binary, 3D) to cloud." << std::endl; + std::abort(); +} + + + +int main(int argc, char* argv[]) +{ + using namespace mln; + + if (argc != 3) + usage(argv); + + trace::entering("main"); + + std::string filename = argv[1]; + + image3d<bool> vol; + io::dump::load(vol, argv[1]); + p_array<point3d> arr; + convert::from_to(vol, arr); + io::cloud::save(arr, argv[2]); + + trace::exiting("main"); +} Index: theo/exec/dump2pnm.cc --- theo/exec/dump2pnm.cc (revision 3368) +++ theo/exec/dump2pnm.cc (working copy) @@ -1,17 +1,15 @@ +#include "filetype.hh" -#include <mln/core/image/image2d.hh> -#include <mln/make/image3d.hh> +#include <mln/literal/black.hh> #include <mln/debug/slices_2d.hh> -#include <mln/value/int_u8.hh> -#include <mln/io/dump/load.hh> -#include <mln/io/pgm/save.hh> - void usage(char* argv[]) { - std::cerr << "usage: " << argv[0] << " input.dump output.pgm" << std::endl; + std::cerr << "usage: " << argv[0] << " input.dump output.pnm" << std::endl; + std::cerr << " It works with binary (pbm), gray-level (int_u8), and color (rgb8) images." << std::endl; + std::cerr << " Sample use: binary input.dump -> output.pbm" << std::endl; abort(); } @@ -20,15 +18,76 @@ int main(int argc, char* argv[]) { using namespace mln; - using value::int_u8; if (argc != 3) usage(argv); - image3d<int_u8> vol; + trace::entering("main"); + + std::string filename = argv[2]; + + switch (get_filetype(argv[2])) + { + case filetype::pbm: + { + image3d<bool> vol; io::dump::load(vol, argv[1]); + bool bg = false; + image2d<bool> ima = debug::slices_2d(vol, 1.f, bg); + io::pbm::save(ima, argv[2]); + } + break; + case filetype::pgm: + { + using value::int_u8; + image3d<int_u8> vol; + io::dump::load(vol, argv[1]); int_u8 bg = 0; image2d<int_u8> ima = debug::slices_2d(vol, 1.f, bg); io::pgm::save(ima, argv[2]); } + break; + + case filetype::ppm: + { + using value::rgb8; + image3d<rgb8> vol; + io::dump::load(vol, argv[1]); + rgb8 bg = literal::black; + image2d<rgb8> ima = debug::slices_2d(vol, 1.f, bg); + io::ppm::save(ima, argv[2]); + } + break; + + case filetype::dump: + { + std::cerr << "Output shall not be a dump file!" << std::endl; + usage(argv); + } + break; + + case filetype::unknown: + std::cerr << "unknown filename extension!" << std::endl; + usage(argv); + break; + + default: + std::cerr << "file type not handled!" << std::endl; + usage(argv); + } + + trace::exiting("main"); + + + + +// using namespace mln; +// using value::int_u8; + +// if (argc != 3) +// usage(argv); + +// std::string filename = argv[2]; + +} Property changes on: theo/exec/dump2pnm.cc ___________________________________________________________________ Added: svn:mergeinfo Index: theo/exec/pnms2dump.cc --- theo/exec/pnms2dump.cc (revision 3368) +++ theo/exec/pnms2dump.cc (working copy) @@ -1,16 +1,14 @@ +#include "filetype.hh" -#include <mln/core/image/image2d.hh> #include <mln/make/image3d.hh> -#include <mln/value/int_u8.hh> -#include <mln/io/pgm/load.hh> -#include <mln/io/dump/save.hh> void usage(char* argv[]) { - std::cerr << "usage: " << argv[0] << " output.dump input1.pgm .. inputn.pgm" << std::endl; + std::cerr << "usage: " << argv[0] << " output.dump input1.xxx .. inputn.xxx" << std::endl; + std::cerr << " It works with binary (pbm), gray-level (int_u8), and color (rgb8) images." << std::endl; abort(); } @@ -20,12 +18,35 @@ { using namespace mln; using value::int_u8; - typedef image2d<int_u8> I; if (argc < 3) usage(argv); + trace::entering("main"); + + std::string filename = argv[2]; + switch (get_filetype(argv[2])) + { + case filetype::pbm: + { + typedef image2d<bool> I; + util::array<I> arr; + for (int i = 2; i < argc; ++i) + { + I ima; + io::pbm::load(ima, argv[i]); + arr.append(ima); + } + image3d<bool> vol = make::image3d(arr); + io::dump::save(vol, argv[1]); + } + break; + + case filetype::pgm: + { + using value::int_u8; + typedef image2d<int_u8> I; util::array<I> arr; for (int i = 2; i < argc; ++i) { @@ -36,3 +57,41 @@ image3d<int_u8> vol = make::image3d(arr); io::dump::save(vol, argv[1]); } + break; + + case filetype::ppm: + { + using value::rgb8; + typedef image2d<rgb8> I; + util::array<I> arr; + for (int i = 2; i < argc; ++i) + { + I ima; + io::ppm::load(ima, argv[i]); + arr.append(ima); + } + image3d<rgb8> vol = make::image3d(arr); + io::dump::save(vol, argv[1]); + } + break; + + case filetype::dump: + { + std::cerr << "Output shall not be a dump file!" << std::endl; + usage(argv); + } + break; + + case filetype::unknown: + std::cerr << "unknown filename extension!" << std::endl; + usage(argv); + break; + + default: + std::cerr << "file type not handled!" << std::endl; + usage(argv); + } + + trace::exiting("main"); + +} Property changes on: theo/exec/pnms2dump.cc ___________________________________________________________________ Added: svn:mergeinfo Index: theo/exec/closing_area.cc --- theo/exec/closing_area.cc (revision 0) +++ theo/exec/closing_area.cc (revision 0) @@ -0,0 +1,60 @@ +#include "filetype.hh" +#include <mln/morpho/closing_area.hh> + + + +void usage(char* argv[]) +{ + std::cerr << "usage: " << argv[0] << " input.xxx lambda output.xxx" << std::endl + << " Area closing." << std::endl + << " xxx in { pgm, dump }" << std::endl; + std::abort(); +} + + + +int main(int argc, char* argv[]) +{ + using namespace mln; + using value::int_u8; + + if (argc != 4) + usage(argv); + + trace::entering("main"); + + std::string filename = argv[1]; + unsigned lambda = atoi(argv[2]); + + switch (get_filetype(argv[1])) + { + case filetype::pgm: + { + image2d<int_u8> ima, clo; + io::pgm::load(ima, argv[1]); + clo = morpho::closing_area(ima, c4(), lambda); + io::pgm::save(clo, argv[3]); + } + break; + + case filetype::dump: + { + image3d<int_u8> ima, clo; + io::dump::load(ima, argv[1]); + clo = morpho::closing_area(ima, c6(), lambda); + io::dump::save(clo, argv[3]); + } + break; + + case filetype::unknown: + std::cerr << "unknown filename extension!" << std::endl; + usage(argv); + break; + + default: + std::cerr << "file type not handled!" << std::endl; + usage(argv); + } + + trace::exiting("main"); +} Index: theo/exec/closing_isotropic.cc --- theo/exec/closing_isotropic.cc (revision 0) +++ theo/exec/closing_isotropic.cc (revision 0) @@ -0,0 +1,71 @@ +#include "filetype.hh" + +#include <mln/morpho/closing.hh> +#include <mln/win/disk2d.hh> +#include <mln/win/ball3d.hh> + + + +void usage(char* argv[]) +{ + std::cerr << "usage: " << argv[0] << " input.xxx r output.xxx" << std::endl + << " Closing with an isotropic structuring element." << std::endl + << " xxx is pbm (2D) or dump (3D)." << std::endl; + std::abort(); +} + + + +int main(int argc, char* argv[]) +{ + using namespace mln; + + if (argc != 4) + usage(argv); + + trace::entering("main"); + + int r = std::atoi(argv[2]); + if (r < 0) + { + std::cerr << "bad radius!" << std::endl; + usage(argv); + } + + + std::string filename = argv[1]; + + switch (get_filetype(argv[1])) + { + case filetype::pbm: + { + image2d<bool> ima, out; + io::pbm::load(ima, argv[1]); + out = morpho::closing(ima, win::disk2d(2 * r + 1)); + io::pbm::save(out, argv[3]); + } + break; + + case filetype::dump: + { + image3d<bool> ima, out; + io::dump::load(ima, argv[1]); + out = morpho::closing(ima, win::ball3d(2 * r + 1)); + io::dump::save(out, argv[3]); + } + break; + + case filetype::unknown: + std::cerr << "unknown filename extension!" << std::endl; + usage(argv); + break; + + default: + std::cerr << "file type not handled!" << std::endl; + usage(argv); + } + + + + trace::exiting("main"); +}