[Olena-patches] branch mesh-segm-skel updated: last-svn-commit-250-g5946ef3

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Log ----------------------------------------------------------------- 5946ef3 Configure milena/apps/generic-skel/Makefile. ced2cce New apps on generic skeletonization. 27351d0 apps/graph-morpho: Catch up with current mln::topo::is_n_face. 8ac5e61 Use priority-driven thinning in collapse-based thinnings apps. f714e94 Simplify curvature-based thinnings using 2- and 1-collapses apps. b84bea1 Miscellaneous changes in mesh-related operations. f9882da New apps: max curvature-based thinnings using 2- and 1-collapses. 15ce554 Add VTK versions of some OFF meshes. 082d9ae New app: binary OFF to VTK mesh conversion. a844355 New app performing a 2-collapse on a mesh. 17def89 Prevent a site from being introduced twice in thinning's queues. 48e818f Add routines to identify and detach (collapse) simple pairs. f825089 Merge branch 'vtk-format' into skeletons+vtk-format 1bfe4f9 Small corrections in apps/mesh-segm-skel. 44da300 Exercise topology-related routines. 5bebfce New complex image alias: mln::bin_2complex_image2d. 93a3309 Revamp mln::topo::is_simple_cell. 5fca43e Have is_facet take into account the values of a (complex) image. a69fad4 Revamp topology-related routines. fc56934 Make the interface of thinning algorithms uniform w.r.t. functors. 5326c7c State a cell is not simple if it does not correspond to a facet. d298681 Use mln::data::paste to simplify mesh skeleton applications. 65616e2 Update mesh skeleton applications. 7a48c8c More generic breadth-first-thinning-based skeleton transformations. 5c73804 Introduce a helper to build an mln::mutable_extension_ima. 3076fae Introduce an extension-by-mutable-image morpher. a6b48d3 Get the `detach' argument of thinning algorithms by reference. 004dc21 Get rid of intermediate psites in thinning algorithms. a47828e Have topo::is_n_face take a psite type as class parameter. 8aa5d02 Aesthetic changes in thinning algorithms. dbff476 Fix the processing order in topo::breadth_first_thinning. 313000d Split interface and implementation of topo::is_not_end_point. ----------------------------------------------------------------------- Summary of changes: ChangeLog | 8 + configure.ac | 2 + milena/ChangeLog | 469 + milena/apps/Makefile.am | 6 +- milena/apps/generic-skel/Makefile.am | 54 + .../generic-skel/image2d-skel-unconstrained.cc | 85 + .../generic-skel/image2d-skel-with-end-points.cc | 84 + milena/apps/generic-skel/image2d-skel.hh | 174 + .../test-image2d-skel-unconstrained.in | 24 + .../test-image2d-skel-with-end-points.in | 24 + milena/apps/graph-morpho/morpho.hh | 8 +- milena/apps/mesh-segm-skel/Makefile.am | 83 +- .../apps/mesh-segm-skel/mesh-complex-2-collapse.cc | 155 + .../mesh-complex-max-curv-1-collapse.cc | 377 + .../mesh-complex-max-curv-2-collapse.cc | 319 + .../mesh-segm-skel/mesh-complex-max-curv-skel.cc | 82 +- .../mesh-segm-skel/mesh-complex-pinv-curv-skel.cc | 82 +- milena/apps/mesh-segm-skel/mesh-complex-skel.cc | 85 +- milena/apps/mesh-segm-skel/off-to-vtk-bin.cc | 60 + milena/apps/mesh-segm-skel/save_bin_alt.hh | 310 +- .../mesh-segm-skel/test-mesh-complex-2-collapse.in | 23 + .../test-mesh-complex-max-curv-1-collapse.in | 24 + .../test-mesh-complex-max-curv-2-collapse.in | 24 + .../test-mesh-complex-max-curv-extrema.in | 16 + milena/headers.mk | 10 +- milena/mesh/Makefile.am | 26 +- milena/mesh/bunny-holefilled.vtk |458714 ++++++++++++++++++++ milena/mesh/pseudo-manifold.vtk | 188 + milena/mesh/teapot.vtk |25008 ++ milena/mesh/tetrahedron.vtk | 48 + milena/mln/core/alias/complex_image.hh | 10 +- .../mln/core/image/dmorph/mutable_extension_ima.hh | 272 + milena/mln/core/routine/mutable_extend.hh | 67 + milena/mln/geom/complex_geometry.hh | 17 +- milena/mln/io/off/load.hh | 30 +- milena/mln/io/vtk/all.hh | 47 + milena/mln/io/vtk/load.hh | 615 + milena/mln/io/vtk/save.hh | 653 + milena/mln/make/attachment.hh | 53 +- milena/mln/make/cell.hh | 11 +- milena/mln/make/detachment.hh | 50 +- milena/mln/topo/detach.hh | 83 - milena/mln/topo/detach_cell.hh | 154 + milena/mln/topo/detach_pair.hh | 191 + milena/mln/topo/detach_point.hh | 113 + milena/mln/topo/is_facet.hh | 52 +- milena/mln/topo/is_n_face.hh | 16 +- milena/mln/topo/is_not_end_point.hh | 97 + milena/mln/topo/is_simple_cell.hh | 114 +- milena/mln/topo/is_simple_pair.hh | 225 + milena/mln/topo/is_simple_point2d.hh | 140 + milena/mln/topo/skeleton/breadth_first_thinning.hh | 140 +- .../mln/topo/skeleton/priority_driven_thinning.hh | 207 + milena/tests/core/image/complex_image.hh | 20 +- milena/tests/io/Makefile.am | 3 +- milena/tests/io/vtk/Makefile.am | 33 + milena/tests/io/vtk/load_bin.cc | 60 + milena/tests/io/vtk/load_save_bin.cc | 48 + milena/tests/io/vtk/save.cc | 106 + milena/tests/make/Makefile.am | 6 +- milena/tests/make/attachment.cc | 77 + milena/tests/make/detachment.cc | 98 + milena/tests/topo/Makefile.am | 13 +- milena/tests/topo/detach_pair.cc | 73 + milena/tests/topo/is_facet.cc | 80 + milena/tests/topo/is_simple_pair.cc | 73 + milena/tests/topo/skeleton/Makefile.am | 20 +- .../tests/topo/skeleton/breadth_first_thinning.cc | 74 + .../skeleton/breadth_first_thinning_constrained.cc | 78 + .../topo/skeleton/priority_driven_thinning.cc | 92 + .../priority_driven_thinning_constrained.cc | 96 + milena/tests/unit_test/unit-tests.mk | 4 + 72 files changed, 490616 insertions(+), 367 deletions(-) create mode 100644 milena/apps/generic-skel/Makefile.am create mode 100644 milena/apps/generic-skel/image2d-skel-unconstrained.cc create mode 100644 milena/apps/generic-skel/image2d-skel-with-end-points.cc create mode 100644 milena/apps/generic-skel/image2d-skel.hh create mode 100644 milena/apps/generic-skel/test-image2d-skel-unconstrained.in create mode 100644 milena/apps/generic-skel/test-image2d-skel-with-end-points.in create mode 100644 milena/apps/mesh-segm-skel/mesh-complex-2-collapse.cc create mode 100644 milena/apps/mesh-segm-skel/mesh-complex-max-curv-1-collapse.cc create mode 100644 milena/apps/mesh-segm-skel/mesh-complex-max-curv-2-collapse.cc create mode 100644 milena/apps/mesh-segm-skel/off-to-vtk-bin.cc create mode 100644 milena/apps/mesh-segm-skel/test-mesh-complex-2-collapse.in create mode 100644 milena/apps/mesh-segm-skel/test-mesh-complex-max-curv-1-collapse.in create mode 100644 milena/apps/mesh-segm-skel/test-mesh-complex-max-curv-2-collapse.in mode change 100755 => 100644 milena/apps/mesh-segm-skel/test-mesh-segm.in create mode 100644 milena/mesh/bunny-holefilled.vtk create mode 100644 milena/mesh/pseudo-manifold.vtk create mode 100644 milena/mesh/teapot.vtk create mode 100644 milena/mesh/tetrahedron.vtk create mode 100644 milena/mln/core/image/dmorph/mutable_extension_ima.hh create mode 100644 milena/mln/core/routine/mutable_extend.hh create mode 100644 milena/mln/io/vtk/all.hh create mode 100644 milena/mln/io/vtk/load.hh create mode 100644 milena/mln/io/vtk/save.hh delete mode 100644 milena/mln/topo/detach.hh create mode 100644 milena/mln/topo/detach_cell.hh create mode 100644 milena/mln/topo/detach_pair.hh create mode 100644 milena/mln/topo/detach_point.hh create mode 100644 milena/mln/topo/is_not_end_point.hh create mode 100644 milena/mln/topo/is_simple_pair.hh create mode 100644 milena/mln/topo/is_simple_point2d.hh create mode 100644 milena/mln/topo/skeleton/priority_driven_thinning.hh create mode 100644 milena/tests/io/vtk/Makefile.am create mode 100644 milena/tests/io/vtk/load_bin.cc create mode 100644 milena/tests/io/vtk/load_save_bin.cc create mode 100644 milena/tests/io/vtk/save.cc create mode 100644 milena/tests/make/attachment.cc create mode 100644 milena/tests/make/detachment.cc create mode 100644 milena/tests/topo/detach_pair.cc create mode 100644 milena/tests/topo/is_facet.cc create mode 100644 milena/tests/topo/is_simple_pair.cc create mode 100644 milena/tests/topo/skeleton/breadth_first_thinning.cc create mode 100644 milena/tests/topo/skeleton/breadth_first_thinning_constrained.cc create mode 100644 milena/tests/topo/skeleton/priority_driven_thinning.cc create mode 100644 milena/tests/topo/skeleton/priority_driven_thinning_constrained.cc hooks/post-receive -- Olena, a generic and efficient image processing platform