[Olena-patches] branch mesh-segm-skel updated: last-svn-commit-288-g4909e37

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Log ----------------------------------------------------------------- 4909e37 Add tests to generate figures for the WADGMM 2010/LNCS submission. 501e7cf Introduce a no-constraint functor to replace fun::p2b::tautology. 4f66070 Factor code of 2D skeletonizations in apps/generic-skel/. 010c8ad Misc changes in apps/generic-skel/ and tools/. 7633d6b Exercise breadth-first thinning with predicate is_not_1d_isthmus. bced3c0 Add a non 1D isthmus predicate for (2D and 3D) binary images. 3351dd9 Check the consistency of tools/simple_point3d_lut_26_6.hh. 03fc660 Fix and improve the (fast) computation of 2D connectivity numbers. c3438b9 Add more tests. 7a9ba19 apps/generic-skel/image3d-skel.hh: Add `inline' qualifiers. 2278386 Introduce a better VTK output routine in apps/generic-skel. c7ca4da Add a VTK output routine in apps/generic-skel. 19e5634 Use package metadata macros instead of hard-coded strings in I/Os. a56681a No longer consider mln/version.hh.in as handled by autoheader. 3f01437 Pass the URL of the project to AC_INIT. ffee393 Remove buggy symbol definitions. 7d862f6 Set connectivity number functions when building is_simple_point3d. 494c594 Fix, factor and improve the (exact) simple 3D point criterion. 1b53b90 Add routines to compute 3D connectivity numbers. bd0c64e Improve the generation of simple 3D point look-up tables. 656d1e5 tools: s/simple_point_3d/simple_point3d/. 5c00547 New app: apps/generic-skel/image3d-skel-unconstrained. f4c7fbf Isolate reusable code from image3d-skel-with-end-points. 64de1ca Add a 3D volume of the Stanford bunny. 3775f01 New application computing a 3D skeleton preserving end points. 4d3cc3a Regen Milena's Makefile helpers. b5877a3 Add a first version of a simple 3D point predicate. 7fbb81e Generate a simple 3D points look-up table for the (26,6)-adjacency. d8cfdb5 Parallel computation of simple 3D point look-up tables. dc1f49e Sequential computation of simple 3D points look-up tables. 4d52cf7 Improve mln::connectivity_number_2d. 19d12e8 Factor connectivity_numbers_3d and connectivity_numbers_3d_tbb. 6d2f056 Add a parallel version of connectivity_numbers_3d using TBB. da5b1fe Make tools/connectivity_numbers_3d thread-safe. 83227d2 Factor soon-to-be shared components of connectivity_numbers_3d. d2cb9c7 Add a tool to compute 3D connectivity numbers. 56b5137 Have tools/compute_local_configurations compile. 3e9183f Import the computation of (2D) connectivity numbers from sandbox. ----------------------------------------------------------------------- Summary of changes: ChangeLog | 14 + configure.ac | 17 +- milena/ChangeLog | 456 ++++++++++++++++++++ milena/Makefile.am | 1 + milena/apps/generic-skel/Makefile.am | 70 +++- .../generic-skel/image2d-skel-unconstrained.cc | 27 +- .../generic-skel/image2d-skel-with-end-points.cc | 24 +- milena/apps/generic-skel/image2d-skel.hh | 174 -------- .../generic-skel/image3d-skel-unconstrained.cc | 108 +++++ .../generic-skel/image3d-skel-with-1d-isthmuses.cc | 114 +++++ .../generic-skel/image3d-skel-with-end-points.cc | 114 +++++ milena/apps/generic-skel/image3d-skel.hh | 399 +++++++++++++++++ milena/apps/generic-skel/test-mixed.in | 25 ++ milena/apps/mesh-segm-skel/Makefile.am | 31 ++- .../mesh-complex-max-curv-1-collapse.cc | 15 +- .../mesh-complex-max-curv-2-collapse.cc | 15 +- .../mesh-segm-skel/mesh-complex-pinv-curv-skel.cc | 14 +- milena/apps/mesh-segm-skel/test-mixed.in | 25 ++ milena/headers.mk | 8 + milena/img/README | 6 + milena/img/bunny.pgm | Bin 0 -> 27000043 bytes milena/mln/fun/p2b/antilogy.hh | 1 - milena/mln/fun/p2b/tautology.hh | 1 - milena/mln/io/fld/write_header.hh | 9 +- milena/mln/io/off/save.hh | 9 +- milena/mln/io/pnm/save_header.hh | 10 +- milena/mln/io/vtk/save.hh | 3 +- milena/mln/topo/connectivity_number_2d.hh | 130 ++++++ milena/mln/topo/connectivity_number_3d.hh | 308 +++++++++++++ milena/mln/topo/detach_point.hh | 1 + milena/mln/topo/is_not_1d_isthmus.hh | 210 +++++++++ milena/mln/topo/is_not_end_point.hh | 42 ++- milena/mln/topo/is_simple_2d.hh | 42 +- milena/mln/topo/is_simple_point2d.hh | 5 +- milena/mln/topo/is_simple_point3d.hh | 191 ++++++++ milena/mln/topo/no_constraint.hh | 82 ++++ milena/mln/topo/skeleton/breadth_first_thinning.hh | 17 +- .../mln/topo/skeleton/priority_driven_thinning.hh | 17 +- milena/mln/version.hh.in | 19 +- milena/tests/core/alias/Makefile.am | 5 +- milena/tests/core/alias/dpoint2d.cc | 4 +- milena/tests/core/alias/neighb2d.cc | 54 +++ milena/tests/io/dump/Makefile.am | 7 +- milena/tests/io/dump/dump.cc | 35 ++- milena/tests/topo/Makefile.am | 5 + milena/tests/topo/connectivity_numbers_2d.cc | 87 ++++ milena/tests/unit_test/unit-tests.mk | 32 ++- milena/tests/value/Makefile.am | 6 +- milena/tests/value/int_u32.cc | 37 ++ milena/tools/Makefile.am | 63 +++- milena/tools/compute_local_configurations.cc | 109 +++++ milena/tools/connectivity_numbers_3d.cc | 46 ++ milena/tools/connectivity_numbers_3d.hh | 407 +++++++++++++++++ milena/tools/connectivity_numbers_3d_tbb.cc | 47 ++ milena/tools/connectivity_numbers_3d_tbb.hh | 167 +++++++ milena/tools/gen_cxx_lut | 103 +++++ milena/tools/simple_point3d_lut.cc | 48 ++ milena/tools/simple_point3d_lut.hh | 190 ++++++++ milena/tools/simple_point3d_lut_26_6.cc | 30 ++ milena/tools/simple_point3d_lut_tbb.hh | 189 ++++++++ milena/tools/simple_point_3d_lut_tbb.cc | 49 +++ milena/tools/test_simple_point3d_lut_26_6.cc | 136 ++++++ milena/tools/tools.mk | 6 +- 63 files changed, 4335 insertions(+), 281 deletions(-) delete mode 100644 milena/apps/generic-skel/image2d-skel.hh create mode 100644 milena/apps/generic-skel/image3d-skel-unconstrained.cc create mode 100644 milena/apps/generic-skel/image3d-skel-with-1d-isthmuses.cc create mode 100644 milena/apps/generic-skel/image3d-skel-with-end-points.cc create mode 100644 milena/apps/generic-skel/image3d-skel.hh create mode 100644 milena/apps/generic-skel/test-mixed.in create mode 100644 milena/apps/mesh-segm-skel/test-mixed.in create mode 100755 milena/img/bunny.pgm create mode 100644 milena/mln/topo/connectivity_number_2d.hh create mode 100644 milena/mln/topo/connectivity_number_3d.hh create mode 100644 milena/mln/topo/is_not_1d_isthmus.hh create mode 100644 milena/mln/topo/is_simple_point3d.hh create mode 100644 milena/mln/topo/no_constraint.hh create mode 100644 milena/tests/core/alias/neighb2d.cc create mode 100644 milena/tests/topo/connectivity_numbers_2d.cc create mode 100644 milena/tests/value/int_u32.cc create mode 100644 milena/tools/compute_local_configurations.cc create mode 100644 milena/tools/connectivity_numbers_3d.cc create mode 100644 milena/tools/connectivity_numbers_3d.hh create mode 100644 milena/tools/connectivity_numbers_3d_tbb.cc create mode 100644 milena/tools/connectivity_numbers_3d_tbb.hh create mode 100755 milena/tools/gen_cxx_lut create mode 100644 milena/tools/simple_point3d_lut.cc create mode 100644 milena/tools/simple_point3d_lut.hh create mode 100644 milena/tools/simple_point3d_lut_26_6.cc create mode 100644 milena/tools/simple_point3d_lut_tbb.hh create mode 100644 milena/tools/simple_point_3d_lut_tbb.cc create mode 100644 milena/tools/test_simple_point3d_lut_26_6.cc hooks/post-receive -- Olena, a generic and efficient image processing platform