[Olena-patches] olena-2.0-50-gcffe62e Merge branch 'apps-morphers' into next

This is a merge commit message of the following branches: Merge: b654f0d 13174ea Conflicts: ChangeLog milena/ChangeLog ChangeLog | 4 + configure.ac | 1 + milena/ChangeLog | 154 +++++++++++++++++ milena/apps/Makefile.am | 5 +- milena/apps/morphers/Makefile.am | 76 +++++++++ milena/apps/morphers/image2d-skel.hh | 137 +++++++++++++++ milena/apps/morphers/iz.cc | 173 +++++++++++++++++++ milena/apps/morphers/iz_input.pbm | Bin 0 -> 21890 bytes milena/apps/morphers/lazy_recorder.cc | 62 +++++++ milena/apps/morphers/lazy_recorder.hh | 206 +++++++++++++++++++++++ milena/apps/morphers/mask+channel.cc | 67 ++++++++ milena/apps/morphers/mask+recorder.cc | 65 +++++++ milena/apps/morphers/recorder-bft.cc | 114 +++++++++++++ milena/apps/morphers/recorder-wst.cc | 106 ++++++++++++ milena/apps/morphers/recorder.cc | 61 +++++++ milena/apps/morphers/recorder.hh | 182 ++++++++++++++++++++ milena/mln/core/image/imorph/decorated_image.hh | 26 +++ milena/mln/tag/init.hh | 3 + 18 files changed, 1440 insertions(+), 2 deletions(-) diff --cc ChangeLog index 6f2cfc5,e56f5cc..b3e00ef --- a/ChangeLog +++ b/ChangeLog @@@ -1,32 -1,7 +1,36 @@@ + 2011-11-14 Roland Levillain &lt;roland(a)lrde.epita.fr&gt; + + * configure.ac: Configure milena/apps/morphers/Makefile. + +2011-11-16 Guillaume Lazzara &lt;z(a)lrde.epita.fr&gt; + + * m4/oln-with-lib.m4: Lookup for multiple AND single libraries + while checking Tesseract availability. + +2011-11-25 Roland Levillain &lt;roland(a)lrde.epita.fr&gt; + + Update lrde-scmstats.sh. + + * lrde-scmstats.sh: Look more like lrde-upload.sh. + Ensure generated data is readable from the Web. + Anonymize some names as requested by some contributors. + +2011-11-24 Guillaume Lazzara &lt;z(a)lrde.epita.fr&gt; + + * distrib/macports/Portfile.in: Fix maintainers field. + +2011-11-24 Guillaume Lazzara &lt;z(a)lrde.epita.fr&gt; + + * lrde-scmstats.sh: Fix branch name ambiguities. + +2011-11-23 Guillaume Lazzara &lt;z(a)lrde.epita.fr&gt; + + * lrde-scmstats.sh: Compute stats per branches. + +2011-11-23 Guillaume Lazzara &lt;z(a)lrde.epita.fr&gt; + + * lrde-upload.sh: Update list of branches. + 2011-10-06 Roland Levillain &lt;roland(a)lrde.epita.fr&gt; * README (Bibliography): Mention the GRETSI 2011 paper. diff --cc milena/ChangeLog index 745f38b,fcd3962..c1289de --- a/milena/ChangeLog +++ b/milena/ChangeLog @@@ -1,195 -1,157 +1,349 @@@ + 2012-09-25 Roland Levillain &lt;roland(a)lrde.epita.fr&gt; + + Fix file names in apps/morphers/recorder-bft. + + * apps/morphers/recorder-bft.cc, + * apps/morphers/Makefile.am (recorder_SOURCES): + s/lena/picasso/. + + 2012-06-21 Roland Levillain &lt;roland(a)lrde.epita.fr&gt; + + Improve the (movie) output of apps/morphers/iz. + + * apps/morphers/iz.cc (save_colorized): Skip consecutive identical + frames. + Swap the frame reconstruction and write operations, so that the + last frame is eventually saved. + * apps/morphers/Makefile.am (tmp_iz.avi): Use a speedup of 50 + instead of 10. + + 2012-06-21 Roland Levillain &lt;roland(a)lrde.epita.fr&gt; + + Use the lazy recorder morpher in apps/morphers/iz. + + * apps/morphers/iz.cc (main): Here. + Save the sequence of recorder images as PNG images using Magick++. + (save_colorized): New function. + * apps/morphers/Makefile.am + (noinst_PROGRAMS, iz_SOURCES) [HAVE_MAGICKXX]: Build `iz' only if + Magick++ is available. + (iz_output.ppm) [HAVE_MAGICKXX]: Likewise. + (iz_CPPFLAGS, iz_LDFLAGS) [HAVE_MAGICKXX]: New. + (tmp_iz.avi) [HAVE_MAGICKXX]: New target. + (MOSTLYCLEANFILES): Add tmp_iz??????.png. + + 2012-06-20 Roland Levillain &lt;roland(a)lrde.epita.fr&gt; + + Add rules to build and run apps/morphers/iz. + + * apps/morphers/Makefile.am (noinst_PROGRAMS): Add iz. + (iz_SOURCES): New. + (EXTRA_DIST): Add iz_input.pbm. + (iz_output.ppm): New target. + (MOSTLYCLEANFILES): Add tmp_clo.pgm, tmp_dmap.pgm, + tmp_ws_superpose.ppm, tmp_ws.ppm, tmp_lab.pgm, tmp_iz.pgm, + tmp_iz.ppm and tmp_iz_input.ppm. + + 2012-06-20 Thierry Geraud &lt;thierry.geraud(a)lrde.epita.fr&gt; + + New example demonstrating the use of influence zones. + + * apps/morphers/iz.cc: New. + * apps/morphers/iz_input.pbm: New. + + 2012-06-21 Roland Levillain &lt;roland(a)lrde.epita.fr&gt; + + New ``lazy'' recorder morpher in apps/morpher. + + * apps/morphers/lazy_recorder.hh: New. + * apps/morphers/lazy_recorder.cc: New test. + * apps/morphers/Makefile.am (noinst_HEADERS): + Add lazy_recorder.hh. + (noinst_PROGRAMS): Add lazy_recorder. + (lazy_recorder_SOURCES): New. + (MOSTLYCLEANFILES): Add lena-fill-lazy??????.ppm. + + 2012-06-21 Roland Levillain &lt;roland(a)lrde.epita.fr&gt; + + Render the recorder morpher more generic. + + * apps/morphers/recorder.hh (recorder<I>::sequence): Store a + sequence of concrete images. + Add missing inline keywords. + Improve the documentation. + + 2011-11-28 Roland Levillain &lt;roland(a)lrde.epita.fr&gt; + + New morpher example: recording a breadth-first thinning. + + * apps/morphers/recorder-bft.cc: New. + * apps/morphers/image2d-skel.hh: New. + * apps/morphers/Makefile.am (noinst_PROGRAMS): Add recorder-bft. + (recorder_wst_SOURCES): New. + (recorder_SOURCES, recorder_wst_SOURCES, mask_recorder_SOURCES): + Move recorder.hh... + (noinst_HEADERS): ...here (new variable). + (MOSTLYCLEANFILES): Add lena-bft??????.pbm. + + 2011-11-24 Roland Levillain &lt;roland(a)lrde.epita.fr&gt; + + New morpher example: recording a watershed transform. + + * apps/morphers/recorder-wst.cc: New. + * apps/morphers/Makefile.am (noinst_PROGRAMS): Add recorder-wst. + (recorder_wst_SOURCES): New. + (MOSTLYCLEANFILES): lena-wst??????.ppm. + + 2011-11-24 Roland Levillain &lt;roland(a)lrde.epita.fr&gt; + + Work around decorated_image's lack of properties, for the recorder. + + * apps/morphers/recorder.hh + (trait::image_< decorated_image<I,D> >): Replace with.. + (trait::image_< decorated_image<I, recorder<I> > >): ...this. + Add a value_storage property. + (ch_value_< decorated_image< image_<I>, data_< recorder<I> > >, V >): + New trait, to handle changes of value types in images decorated + with a recorder. + * apps/morphers/mask+channel.cc, + * apps/morphers/mask+recorder.cc, + * apps/morphers/recorder.cc: + Simplify these programs thanks to the preceding changes. + + 2011-11-24 Roland Levillain &lt;roland(a)lrde.epita.fr&gt; + + Fix the initialization of mln::decorated_image. + + * mln/tag/init.hh (tag::data_t): New tag type. + (tag::data): New tag. + * mln/core/image/imorph/decorated_image.hh + (init_(tag::data_t, D&, const decorated_image<I,D>&)) + (init_(tag::data_t, D&, const decorated_image<I,D2>&)) + (init_(tag::image_t, decorated_image<I,D>&, const J&)): + New functions. + + 2011-11-18 Roland Levillain &lt;roland(a)lrde.epita.fr&gt; + + Simplify some apps/morpher programs using mln::make::box2d. + + * apps/morphers/mask+recorder.cc, + * apps/morphers/mask+channel.cc: + Here. + + 2011-11-18 Roland Levillain &lt;roland(a)lrde.epita.fr&gt; + + Refactor apps/morphers. + + * apps/morphers/recorder.cc, + * apps/morphers/mask+recorder.cc: + Factor common parts... + * apps/morphers/recorder.hh: ...here (new file). + * apps/morphers/Makefile.am + (recorder_SOURCES, mask_recorder_SOURCES): Add recorder.hh. + + 2011-11-14 Roland Levillain &lt;roland(a)lrde.epita.fr&gt; + + Add examples of morphers. + + * apps/morphers/mask+channel.cc, + * apps/morphers/recorder.cc, + * apps/morphers/mask+recorder.cc: + New. + * apps/morphers/Makefile.am: New. + * apps/Makefile.am (SUBDIRS): Add morphers. + +2011-11-24 Roland Levillain &lt;roland(a)lrde.epita.fr&gt; + + Honor a precondition in classification examples (ISMM 2009). + + * apps/papers/levillain.09.ismm/classif-graph.cc, + * apps/papers/levillain.09.ismm/classif-1complex.cc: + Do not use a value outside the range [0, nbasins] in `canvas_wst' + to prevent a failed precondition in labeling::colorize (when + NDEBUG is not defined). + Reported by David Coeurjolly <david.coeurjolly at liris.cnrs.fr>. + +2011-10-11 Roland Levillain &lt;roland(a)lrde.epita.fr&gt; + + Graph-based version of the classification example. + + * apps/papers/levillain.09.ismm/classif-graph.cc: New. + * apps/papers/levillain.09.ismm/Makefile.am (noinst_PROGRAMS): + Add classif-graph. + (classif_graph_SOURCES): New. + (noinst_DATA): Add classwst-graph.ppm. + (classwst-graph.ppm): New target. + +2011-10-10 Roland Levillain &lt;roland(a)lrde.epita.fr&gt; + + Rename apps/papers/levillain.09.ismm/classif.cc. + + * apps/papers/levillain.09.ismm/classif.cc: Rename as... + * apps/papers/levillain.09.ismm/classif-1complex.cc: ...this. + * apps/papers/levillain.09.ismm/Makefile.am + (noinst_PROGRAMS, noinst_DATA): s/classif/classif-1complex/. + (classif_SOURCES, classwst.pnm): Replace by... + (classif_1complex_SOURCES, classwst-1complex.ppm): ...these. + +2011-10-10 Roland Levillain &lt;roland(a)lrde.epita.fr&gt; + + Aesthetic changes in apps/papers/levillain.09.ismm/classif.cc. + + * apps/papers/levillain.09.ismm/classif.cc: Here. + Remove useless headers inclusions. + Adjust comments. + +2011-10-05 Roland Levillain &lt;roland(a)lrde.epita.fr&gt; + + Fix and clean up apps/papers/levillain.09.ismm/classif.cc. + + * apps/papers/levillain.09.ismm/classif.cc (main): Actually use + the chain() routine from chain.hh instead of ad hoc code. + Move code related to the construction of the 1-complex (graph) + image on which the processing chain is run... + (make_complex_image): ...here. + * apps/papers/levillain.09.ismm/Makefile.am (classwst.pnm): Change + the lambda (area) parameter to 4. + +2011-10-04 Roland Levillain &lt;roland(a)lrde.epita.fr&gt; + + Import the WST-based classification in apps/papers/levillain.09.ismm. + + * apps/papers/levillain.09.ismm/Makefile.am + (noinst_PROGRAMS): Add classif. + (classif_SOURCES): Add classif.cc + (dist_noinst_DATA): Add classseedsi.pbm. + (noinst_DATA): Add classwst.pnm. + (classwst.pnm): New target. + * apps/papers/levillain.09.ismm/classif.cc: New. + Copied and adapted from + sandbox/theo/esiee/laurent/presentation/classif.cc. + * apps/papers/levillain.09.ismm/classseedsi.pbm: New. + +2011-10-04 Roland Levillain &lt;roland(a)lrde.epita.fr&gt; + + Split apps/papers/levillain.09.ismm/graph.cc. + + * apps/papers/levillain.09.ismm/graph.cc: Misc. changes. + (mln::influence_zones) + (mln::io::neato::save): + Move functions... + * apps/papers/levillain.09.ismm/influence_zones.hh, + * apps/papers/levillain.09.ismm/io.hh: + ...here (new files). + * apps/papers/levillain.09.ismm/Makefile.am (noinst_HEADERS): + Add io.hh and influence_zones.hh + +2011-11-29 Guillaume Lazzara &lt;z(a)lrde.epita.fr&gt; + + Fix the initialization of all global constants (ticket #43) + + * mln/debug/slices_2d.hh, + * mln/io/dump/get_header.hh, + * mln/io/fld/header.hh, + * mln/io/fld/load.hh, + * mln/io/fld/load_header.hh, + * mln/io/off/load.hh, + * mln/io/off/save.hh, + * mln/math/jacobi.hh, + * mln/morpho/hit_or_miss.hh, + * mln/world/binary_2d/subsample.hh: Add missing 'inline'. + + * tests/Makefile.am (CXXFLAGS): Add -DMLN_WO_GLOBAL_VARS. + + * tests/global_vars1.cc, + * tests/global_vars2.cc: Make take MLN_WO_GLOBAL_VARS into + consideration. + +2011-11-28 Guillaume Lazzara &lt;z(a)lrde.epita.fr&gt; + + Fix invalid minimum value for builtin floating types. (ticket #247) + + * mln/value/builtin/floatings.hh: Here. + + * tests/value/builtin/floatings.cc: write test. + +2011-11-24 Guillaume Lazzara &lt;z(a)lrde.epita.fr&gt; + + * mln/fun/v2v/rgb_to_hsl.hh: Fix constructor declaration. + +2011-11-23 Guillaume Lazzara &lt;z(a)lrde.epita.fr&gt; + + Fix compilation with multiple files. + + * mln/canvas/browsing/backdiagonal2d.hh, + * mln/canvas/browsing/breadth_first_search.hh, + * mln/canvas/browsing/depth_first_search.hh, + * mln/canvas/browsing/diagonal2d.hh, + * mln/canvas/browsing/dir_struct_elt_incr_update.hh, + * mln/canvas/browsing/directional.hh, + * mln/canvas/browsing/fwd.hh, + * mln/canvas/browsing/hyper_directional.hh, + * mln/canvas/browsing/snake_fwd.hh, + * mln/canvas/browsing/snake_generic.hh, + * mln/canvas/browsing/snake_vert.hh, + * mln/fun/v2v/hsi_to_rgb.hh, + * mln/fun/v2v/rgb_to_hsi.hh, + * mln/fun/v2v/rgb_to_hsl.hh, + * mln/literal/black.hh, + * mln/literal/colors.hh, + * mln/literal/grays.hh, + * mln/literal/max.hh, + * mln/literal/min.hh, + * mln/literal/white.hh: Add missing inline keyword and + MLN_WO_GLOBAL_VARS guards. + +2011-11-23 Guillaume Lazzara &lt;z(a)lrde.epita.fr&gt; + + Fix more compilation issues with g++ 4.6.1 and clang++. + + * mln/canvas/browsing/snake_vert.hh, + * mln/fun/v2v/hsi_to_rgb.hh, + * mln/fun/v2v/rgb_to_hsi.hh, + * mln/fun/v2v/rgb_to_hsl.hh, + * mln/literal/grays.hh, + * mln/literal/identity.hh, + * mln/literal/max.hh, + * mln/literal/min.hh, + * mln/literal/one.hh, + * mln/literal/origin.hh, + * mln/literal/zero.hh: Add default constructors. + +2011-11-21 Guillaume Lazzara &lt;z(a)lrde.epita.fr&gt; + + Fix compilation issues with g++ 4.6.1 and clang++. + + * mln/topo/center_only_iter.hh, + * mln/topo/face.hh, + * mln/trait/images.hh, + * mln/convert/from_to.hxx, + * mln/core/image/dmorph/sub_image.hh, + * mln/core/routine/init.hxx, + * mln/algebra/vec.hh: Make declaration and forward declarations + consistent. + + * mln/canvas/browsing/backdiagonal2d.hh, + * mln/canvas/browsing/breadth_first_search.hh, + * mln/canvas/browsing/depth_first_search.hh, + * mln/canvas/browsing/diagonal2d.hh, + * mln/canvas/browsing/dir_struct_elt_incr_update.hh, + * mln/canvas/browsing/directional.hh, + * mln/canvas/browsing/fwd.hh, + * mln/canvas/browsing/hyper_directional.hh, + * mln/canvas/browsing/snake_fwd.hh, + * mln/canvas/browsing/snake_generic.hh, + * mln/canvas/browsing/snake_vert.hh, + * mln/fun/v2v/hsl_to_rgb.hh, + * mln/literal/black.hh, + * mln/literal/colors.hh, + * mln/literal/white.hh: Add a default constructor for global + variable types. + + * mln/canvas/browsing/internal/graph_first_search.hh: Avoid a + warning for an unused variable. + + * mln/data/was.median.hh: Fix type of the reference. + 2011-10-04 Roland Levillain &lt;roland(a)lrde.epita.fr&gt; Handle the case of filling an empty border. hooks/post-receive -- Olena, a generic and efficient image processing platform