October 2009 - Olena-patches

[PATCH 2/5] Add missing copyright headers to configure.ac and Makefile.am's.
by Roland Levillain 29 Oct '09

29 Oct '09

* configure.ac, * Makefile.am, * bin/Makefile.am, * config/Makefile.am, * data/Makefile.am, * libmd5/Makefile.am, * src/Makefile.am, * test/Makefile.am, * test/vaucanson/Makefile.am: Here. --- dynamic-use-of-static-c++/ChangeLog | 15 +++++++++++++++ dynamic-use-of-static-c++/Makefile.am | 16 ++++++++++++++++ dynamic-use-of-static-c++/bin/Makefile.am | 16 ++++++++++++++++ dynamic-use-of-static-c++/config/Makefile.am | 16 ++++++++++++++++ dynamic-use-of-static-c++/configure.ac | 16 ++++++++++++++++ dynamic-use-of-static-c++/data/Makefile.am | 19 ++++++++++++++++++- dynamic-use-of-static-c++/libmd5/Makefile.am | 17 +++++++++++++++++ dynamic-use-of-static-c++/src/Makefile.am | 16 ++++++++++++++++ dynamic-use-of-static-c++/test/Makefile.am | 16 ++++++++++++++++ .../test/vaucanson/Makefile.am | 16 ++++++++++++++++ 10 files changed, 162 insertions(+), 1 deletions(-) diff --git a/dynamic-use-of-static-c++/ChangeLog b/dynamic-use-of-static-c++/ChangeLog index 2a072f4..aa42cf6 100644 --- a/dynamic-use-of-static-c++/ChangeLog +++ b/dynamic-use-of-static-c++/ChangeLog @@ -1,3 +1,18 @@ +2009-10-27 Roland Levillain <roland(a)lrde.epita.fr> + + Add missing copyright headers to configure.ac and Makefile.am's. + + * configure.ac, + * Makefile.am, + * bin/Makefile.am, + * config/Makefile.am, + * data/Makefile.am, + * libmd5/Makefile.am, + * src/Makefile.am, + * test/Makefile.am, + * test/vaucanson/Makefile.am: + Here. + 2009-10-26 Roland Levillain <roland(a)lrde.epita.fr> Send dyn patches to the olena-patches mailing list. diff --git a/dynamic-use-of-static-c++/Makefile.am b/dynamic-use-of-static-c++/Makefile.am index 55d40c3..a769c69 100644 --- a/dynamic-use-of-static-c++/Makefile.am +++ b/dynamic-use-of-static-c++/Makefile.am @@ -1,3 +1,19 @@ +# Copyright (C) 2005, 2009 EPITA Research and Development Laboratory (LRDE). +# +# This file is part of Olena. +# +# Olena is free software: you can redistribute it and/or modify it under +# the terms of the GNU General Public License as published by the Free +# Software Foundation, version 2 of the License. +# +# Olena is distributed in the hope that it will be useful, +# but WITHOUT ANY WARRANTY; without even the implied warranty of +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU +# General Public License for more details. +# +# You should have received a copy of the GNU General Public License +# along with Olena. If not, see <http://www.gnu.org/licenses/>. + SUBDIRS = libltdl libmd5 bin src config data test ACLOCAL_AMFLAGS = -I config -I libltdl diff --git a/dynamic-use-of-static-c++/bin/Makefile.am b/dynamic-use-of-static-c++/bin/Makefile.am index 41bad07..4b0a257 100644 --- a/dynamic-use-of-static-c++/bin/Makefile.am +++ b/dynamic-use-of-static-c++/bin/Makefile.am @@ -1,3 +1,19 @@ +# Copyright (C) 2005 EPITA Research and Development Laboratory (LRDE). +# +# This file is part of Olena. +# +# Olena is free software: you can redistribute it and/or modify it under +# the terms of the GNU General Public License as published by the Free +# Software Foundation, version 2 of the License. +# +# Olena is distributed in the hope that it will be useful, +# but WITHOUT ANY WARRANTY; without even the implied warranty of +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU +# General Public License for more details. +# +# You should have received a copy of the GNU General Public License +# along with Olena. If not, see <http://www.gnu.org/licenses/>. + bin_SCRIPTS = dyn-config # FIXME put dyn- before these binaries noinst_SCRIPTS = mk_swig_input swig_tree_to_yaml yaml_to_dyn_decls diff --git a/dynamic-use-of-static-c++/config/Makefile.am b/dynamic-use-of-static-c++/config/Makefile.am index 0b6a05c..5209d05 100644 --- a/dynamic-use-of-static-c++/config/Makefile.am +++ b/dynamic-use-of-static-c++/config/Makefile.am @@ -1 +1,17 @@ +# Copyright (C) 2005 EPITA Research and Development Laboratory (LRDE). +# +# This file is part of Olena. +# +# Olena is free software: you can redistribute it and/or modify it under +# the terms of the GNU General Public License as published by the Free +# Software Foundation, version 2 of the License. +# +# Olena is distributed in the hope that it will be useful, +# but WITHOUT ANY WARRANTY; without even the implied warranty of +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU +# General Public License for more details. +# +# You should have received a copy of the GNU General Public License +# along with Olena. If not, see <http://www.gnu.org/licenses/>. + ruby.m4: rbconfig_gen.rb config/mk_local_config_rb_in.rb diff --git a/dynamic-use-of-static-c++/configure.ac b/dynamic-use-of-static-c++/configure.ac index fbaa31c..5235efe 100644 --- a/dynamic-use-of-static-c++/configure.ac +++ b/dynamic-use-of-static-c++/configure.ac @@ -1,3 +1,19 @@ +# Copyright (C) 2005, 2009 EPITA Research and Development Laboratory (LRDE). +# +# This file is part of Olena. +# +# Olena is free software: you can redistribute it and/or modify it under +# the terms of the GNU General Public License as published by the Free +# Software Foundation, version 2 of the License. +# +# Olena is distributed in the hope that it will be useful, +# but WITHOUT ANY WARRANTY; without even the implied warranty of +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU +# General Public License for more details. +# +# You should have received a copy of the GNU General Public License +# along with Olena. If not, see <http://www.gnu.org/licenses/>. + AC_PREREQ([2.61]) # Catch some macros that are not expanded. diff --git a/dynamic-use-of-static-c++/data/Makefile.am b/dynamic-use-of-static-c++/data/Makefile.am index afdbe34..698b1f8 100644 --- a/dynamic-use-of-static-c++/data/Makefile.am +++ b/dynamic-use-of-static-c++/data/Makefile.am @@ -1,4 +1,21 @@ -# Do not install me +# Copyright (C) 2005, 2009 EPITA Research and Development Laboratory (LRDE). +# +# This file is part of Olena. +# +# Olena is free software: you can redistribute it and/or modify it under +# the terms of the GNU General Public License as published by the Free +# Software Foundation, version 2 of the License. +# +# Olena is distributed in the hope that it will be useful, +# but WITHOUT ANY WARRANTY; without even the implied warranty of +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU +# General Public License for more details. +# +# You should have received a copy of the GNU General Public License +# along with Olena. If not, see <http://www.gnu.org/licenses/>. + + +# Do not install me. lib_LTLIBRARIES = libdyn_function.la # FIXME: This is probably not portable! # libdyn_function_la_LDFLAGS = `dyn-config --libtool-libs` diff --git a/dynamic-use-of-static-c++/libmd5/Makefile.am b/dynamic-use-of-static-c++/libmd5/Makefile.am index a445800..9d4a4db 100644 --- a/dynamic-use-of-static-c++/libmd5/Makefile.am +++ b/dynamic-use-of-static-c++/libmd5/Makefile.am @@ -1,3 +1,20 @@ +# Copyright (C) 2009 EPITA Research and Development Laboratory (LRDE). +# +# This file is part of Olena. +# +# Olena is free software: you can redistribute it and/or modify it under +# the terms of the GNU General Public License as published by the Free +# Software Foundation, version 2 of the License. +# +# Olena is distributed in the hope that it will be useful, +# but WITHOUT ANY WARRANTY; without even the implied warranty of +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU +# General Public License for more details. +# +# You should have received a copy of the GNU General Public License +# along with Olena. If not, see <http://www.gnu.org/licenses/>. + + # A C++ implementation of the MD5 algorithm adapted from RSA Data # Security's implementation. # diff --git a/dynamic-use-of-static-c++/src/Makefile.am b/dynamic-use-of-static-c++/src/Makefile.am index 00504b7..7248bb5 100644 --- a/dynamic-use-of-static-c++/src/Makefile.am +++ b/dynamic-use-of-static-c++/src/Makefile.am @@ -1,3 +1,19 @@ +# Copyright (C) 2005, 2009 EPITA Research and Development Laboratory (LRDE). +# +# This file is part of Olena. +# +# Olena is free software: you can redistribute it and/or modify it under +# the terms of the GNU General Public License as published by the Free +# Software Foundation, version 2 of the License. +# +# Olena is distributed in the hope that it will be useful, +# but WITHOUT ANY WARRANTY; without even the implied warranty of +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU +# General Public License for more details. +# +# You should have received a copy of the GNU General Public License +# along with Olena. If not, see <http://www.gnu.org/licenses/>. + include_HEADERS = dyn-all.hh dyn-light.hh lib_LTLIBRARIES = libdyn.la diff --git a/dynamic-use-of-static-c++/test/Makefile.am b/dynamic-use-of-static-c++/test/Makefile.am index 5a6beea..25cec5d 100644 --- a/dynamic-use-of-static-c++/test/Makefile.am +++ b/dynamic-use-of-static-c++/test/Makefile.am @@ -1,3 +1,19 @@ +# Copyright (C) 2005, 2009 EPITA Research and Development Laboratory (LRDE). +# +# This file is part of Olena. +# +# Olena is free software: you can redistribute it and/or modify it under +# the terms of the GNU General Public License as published by the Free +# Software Foundation, version 2 of the License. +# +# Olena is distributed in the hope that it will be useful, +# but WITHOUT ANY WARRANTY; without even the implied warranty of +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU +# General Public License for more details. +# +# You should have received a copy of the GNU General Public License +# along with Olena. If not, see <http://www.gnu.org/licenses/>. + AM_CPPFLAGS = -I$(srcdir)/fixtures -I$(top_srcdir)/src -I$(top_builddir)/src AM_CXXFLAGS = $(WARNING_CXXFLAGS) diff --git a/dynamic-use-of-static-c++/test/vaucanson/Makefile.am b/dynamic-use-of-static-c++/test/vaucanson/Makefile.am index 12719b1..fef65ba 100644 --- a/dynamic-use-of-static-c++/test/vaucanson/Makefile.am +++ b/dynamic-use-of-static-c++/test/vaucanson/Makefile.am @@ -1,3 +1,19 @@ +# Copyright (C) 2005 EPITA Research and Development Laboratory (LRDE). +# +# This file is part of Olena. +# +# Olena is free software: you can redistribute it and/or modify it under +# the terms of the GNU General Public License as published by the Free +# Software Foundation, version 2 of the License. +# +# Olena is distributed in the hope that it will be useful, +# but WITHOUT ANY WARRANTY; without even the implied warranty of +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU +# General Public License for more details. +# +# You should have received a copy of the GNU General Public License +# along with Olena. If not, see <http://www.gnu.org/licenses/>. + # FIXME: Clean me! check-local_DISABLE: tree.yml -- 1.6.5

1 0

[PATCH 1/5] Clean up ChangeLog.
by Roland Levillain 29 Oct '09

29 Oct '09

--- dynamic-use-of-static-c++/ChangeLog | 4 ++-- 1 files changed, 2 insertions(+), 2 deletions(-) diff --git a/dynamic-use-of-static-c++/ChangeLog b/dynamic-use-of-static-c++/ChangeLog index 4ed1afd..2a072f4 100644 --- a/dynamic-use-of-static-c++/ChangeLog +++ b/dynamic-use-of-static-c++/ChangeLog @@ -303,7 +303,7 @@ Disable the ruby segv handler. * src/function_loader.cc: Ignore segv cause the system handle it - normally. + normally. 2005-12-06 Nicolas Pouillard <ertai(a)lrde.epita.fr> @@ -561,7 +561,7 @@ Revert the previous patch. * src/data.erb.hxx, src/data.erb.hh: Restore this useful piece - of code. + of code. 2005-11-25 Nicolas Pouillard <ertai(a)lrde.epita.fr> -- 1.6.5

1 0

4684: Fix compilation issues in IGR's code.
by Guillaume Lazzara 28 Oct '09

28 Oct '09

* sandbox/fabien/igr/Makefile: Add target 'all' and do not use watershed.hh as dependency. * sandbox/fabien/igr/fun_labels.cc, * sandbox/fabien/igr/graph.cc, * sandbox/fabien/igr/mean_slices.cc, * sandbox/fabien/igr/nbasins_finder.cc, * sandbox/fabien/igr/seg2d.cc, * sandbox/fabien/igr/seg_vol_irm.hh, * sandbox/fabien/igr/watershed2d.cc, * sandbox/fabien/igr/watershed3d.cc, * sandbox/fabien/igr/wst_edges.cc: Fix compilations issues. --- milena/sandbox/ChangeLog | 17 +++++ milena/sandbox/fabien/igr/Makefile | 35 +++++++---- milena/sandbox/fabien/igr/fun_labels.cc | 2 +- milena/sandbox/fabien/igr/graph.cc | 77 ++++++++++-------------- milena/sandbox/fabien/igr/mean_slices.cc | 4 +- milena/sandbox/fabien/igr/nbasins_finder.cc | 4 +- milena/sandbox/fabien/igr/seg2d.cc | 4 +- milena/sandbox/fabien/igr/seg_vol_irm.hh | 19 +++--- milena/sandbox/fabien/igr/watershed2d.cc | 87 +++++++++++--------------- milena/sandbox/fabien/igr/watershed3d.cc | 84 +++++++++++--------------- milena/sandbox/fabien/igr/wst_edges.cc | 2 +- 11 files changed, 160 insertions(+), 175 deletions(-) diff --git a/milena/sandbox/ChangeLog b/milena/sandbox/ChangeLog index 08e7332..4191a7e 100644 --- a/milena/sandbox/ChangeLog +++ b/milena/sandbox/ChangeLog @@ -1,5 +1,22 @@ 2009-10-28 Guillaume Lazzara <z(a)lrde.epita.fr> + Fix compilation issues in IGR's code. + + * sandbox/fabien/igr/Makefile: Add target 'all' and do not use + watershed.hh as dependency. + + * sandbox/fabien/igr/fun_labels.cc, + * sandbox/fabien/igr/graph.cc, + * sandbox/fabien/igr/mean_slices.cc, + * sandbox/fabien/igr/nbasins_finder.cc, + * sandbox/fabien/igr/seg2d.cc, + * sandbox/fabien/igr/seg_vol_irm.hh, + * sandbox/fabien/igr/watershed2d.cc, + * sandbox/fabien/igr/watershed3d.cc, + * sandbox/fabien/igr/wst_edges.cc: Fix compilations issues. + +2009-10-28 Guillaume Lazzara <z(a)lrde.epita.fr> + Update IGR's GUI. * demo.pro: Include new files. diff --git a/milena/sandbox/fabien/igr/Makefile b/milena/sandbox/fabien/igr/Makefile index e532fe8..8ded9e0 100644 --- a/milena/sandbox/fabien/igr/Makefile +++ b/milena/sandbox/fabien/igr/Makefile @@ -1,23 +1,33 @@ include Makefile.rules +TGT= seg2d seg3d wsd2d wsd3d nbasins \ + grad clo_vol wst maj graph med \ + thres matlab time_max time_max_norm \ + fun_labels mean_slices \ + crop label2gif min_max_float filter \ + norm dist_edges wst_edges mean_median_label \ + filter_morpho_us + +all: $(TGT) + seg2d: seg_vol_irm.hh seg2d.cc ${CXX} -I../../../ ${DICOM} ${CXXFLAGS} seg2d.cc -o seg2d seg3d: seg_vol_irm.hh seg3d.cc ${CXX} -I../../../ ${DICOM} ${CXXFLAGS} seg3d.cc -o seg3d -wsd2d: watershed.hh watershed2d.cc +wsd2d: watershed2d.cc ${CXX} -I../../../ ${DICOM} ${CXXFLAGS} $^ -o wsd2d -wsd3d: watershed.hh watershed3d.cc +wsd3d: watershed3d.cc ${CXX} -I../../../ ${DICOM} ${CXXFLAGS} $^ -o wsd3d nbasins: nbasins_finder.cc ${CXX} -I../../../ ${DICOM} ${CXXFLAGS} $^ -o nbasins_finder - + grad: grad.cc ${CXX} -I../../../ ${CXXFLAGS} $^ -o grad - + clo_vol: clo_vol.cc ${CXX} -I../../../ ${CXXFLAGS} $^ -o clo_vol @@ -26,27 +36,24 @@ wst: wst.cc maj: maj.cc ${CXX} -I../../../ ${CXXFLAGS} $^ -o maj - + graph: graph.cc ${CXX} -I../../../ ${DICOM} ${CXXFLAGS} $^ -o graph - + med: med.cc ${CXX} -I../../../ ${CXXFLAGS} $^ -o med - + thres: thres.cc ${CXX} -I../../../ ${CXXFLAGS} $^ -o thres - + matlab: matlab.cc ${CXX} -I../../../ ${DICOM} ${CXXFLAGS} -lm $^ -o matlab - + time_max: time_max.cc ${CXX} -I../../../ ${DICOM} ${MAGICK} ${CXXFLAGS} -lm $^ -o time_max - + time_max_norm: time_max_norm.cc ${CXX} -I../../../ ${CXXFLAGS} -lm $^ -o time_max_norm - -first_slice_dicom: first_slice_dicom.cc - ${CXX} -I../../../ ${DICOM} ${MAGICK} ${CXXFLAGS} -lm $^ -o first_slice_dicom fun_labels: fun_labels.cc ${CXX} -I../../../ ${CXXFLAGS} $^ -o fun_labels @@ -73,7 +80,7 @@ norm: norm.cc dist_edges: dist_edges.cc ${CXX} -I../../../ ${CXXFLAGS} $^ -o dist_edges - + wst_edges: wst_edges.cc ${CXX} -I../../../ ${CXXFLAGS} $^ -o wst_edges diff --git a/milena/sandbox/fabien/igr/fun_labels.cc b/milena/sandbox/fabien/igr/fun_labels.cc index 6e48b70..52e661a 100644 --- a/milena/sandbox/fabien/igr/fun_labels.cc +++ b/milena/sandbox/fabien/igr/fun_labels.cc @@ -133,7 +133,7 @@ void plot_all_labels(Image<I>& ima, Image<L>& ima_labels, unsigned nlabels) template <typename L> inline -void save_label_plot(int count, const char* desc, L prev_lbl, util::array<float> arr, int start) +void save_label_plot(int count, const char* desc, L prev_lbl, const util::array<float>& arr, int start) { std::ostringstream slabel; if (count < 10) diff --git a/milena/sandbox/fabien/igr/graph.cc b/milena/sandbox/fabien/igr/graph.cc index 80f7656..b0efdc5 100644 --- a/milena/sandbox/fabien/igr/graph.cc +++ b/milena/sandbox/fabien/igr/graph.cc @@ -1,64 +1,53 @@ #include <iostream> -#include <mln/core/image/image2d.hh> -#include <mln/core/image/image3d.hh> -#include <mln/core/image/dmorph/image_if.hh> +#include <mln/core/alias/dpoint2d.hh> #include <mln/core/alias/neighb2d.hh> -#include <mln/core/alias/window2d.hh> #include <mln/core/alias/neighb3d.hh> +#include <mln/core/alias/vec3d.hh> +#include <mln/core/alias/window2d.hh> #include <mln/core/alias/window3d.hh> +#include <mln/core/image/dmorph/image_if.hh> +#include <mln/core/image/image2d.hh> +#include <mln/core/image/image3d.hh> +#include <mln/core/routine/extend.hh> +#include <mln/core/var.hh> -#include <mln/io/dump/all.hh> -#include <mln/io/dicom/load.hh> -#include <mln/io/pgm/save.hh> -#include <mln/io/ppm/save.hh> - -#include <mln/value/int_u8.hh> -#include <mln/value/int_u12.hh> -#include <mln/value/label_16.hh> -#include <mln/value/label_32.hh> -#include <mln/value/rgb8.hh> - -#include <mln/morpho/watershed/flooding.hh> - -#include <mln/math/diff_abs.hh> - -#include <mln/labeling/mean_values.hh> - +#include <mln/accu/center.hh> +#include <mln/accu/compute.hh> #include <mln/convert/to_fun.hh> -#include <mln/make/graph.hh> -#include <mln/util/graph.hh> +#include <mln/data/stretch.hh> -#include <mln/fun/l2l/wrap.hh> +#include <mln/debug/draw_graph.hh> -#include <mln/core/var.hh> -#include <mln/morpho/elementary/dilation.hh> +#include <mln/draw/box.hh> -#include <mln/core/routine/extend.hh> +#include <mln/fun/v2v/id.hh> -#include <mln/core/alias/vec3d.hh> -#include <mln/debug/draw_graph.hh> -#include <mln/accu/center.hh> +#include <mln/io/dicom/load.hh> #include <mln/io/dump/all.hh> -#include <mln/value/label_8.hh> -#include <mln/value/rgb16.hh> -#include <mln/accu/compute.hh> -#include <mln/core/alias/dpoint2d.hh> -#include <mln/draw/box.hh> -#include <mln/data/stretch.hh> -#include <mln/fun/v2v/id.hh> -#include <mln/fun/l2l/wrap.hh> -#include <mln/core/image/line_graph_elt_neighborhood.hh> +#include <mln/io/pgm/save.hh> +#include <mln/io/ppm/save.hh> + +#include <mln/labeling/colorize.hh> #include <mln/labeling/mean_values.hh> -#include <mln/extension/adjust_fill.hh> -#include <mln/extract/all.hh> + #include <mln/make/region_adjacency_graph.hh> -#include <mln/labeling/colorize.hh> +#include <mln/math/diff_abs.hh> +#include <mln/morpho/elementary/dilation.hh> +#include <mln/morpho/watershed/flooding.hh> +#include <mln/util/graph.hh> +#include <mln/value/int_u12.hh> +#include <mln/value/int_u8.hh> +#include <mln/value/label_16.hh> +#include <mln/value/label_32.hh> +#include <mln/value/label_8.hh> +#include <mln/value/rgb16.hh> +#include <mln/value/rgb8.hh> // Given a color image and a wshed image, computes the component graph. // Vertex values are computed thanks to a RGB image. @@ -274,7 +263,7 @@ int main(int argc, char *argv[]) io::dicom::load(dcm, argv[3]); /// Build graph - util::graph g = make::graph(wshed, c4(), nbasins); + util::graph g = make::region_adjacency_graph(wshed, c4(), nbasins); // Build graph images and compute distance values with a RGB image. mln_VAR(ima_v, make_vertex_graph_image(g, dcm, wshed, nbasins)); mln_VAR(ima_e, make_edge_graph_image(ima_v, g)); @@ -308,7 +297,7 @@ int main(int argc, char *argv[]) image2d<label_16> wsd2 = data::transform(wshed, f); /// Reconstruct a graph from the simplified image. - util::graph g2 = make::graph(wsd2, c4(), nbasins2); + util::graph g2 = make::region_adjacency_graph(wsd2, c4(), nbasins2); // Compute distance values with a RGB image. mln_VAR(ima_v2, make_vertex_graph_image(g2, dcm, wsd2, nbasins2)); diff --git a/milena/sandbox/fabien/igr/mean_slices.cc b/milena/sandbox/fabien/igr/mean_slices.cc index fe3c38b..d064692 100644 --- a/milena/sandbox/fabien/igr/mean_slices.cc +++ b/milena/sandbox/fabien/igr/mean_slices.cc @@ -25,7 +25,7 @@ #include <mln/accu/stat/mean.hh> #include <mln/accu/stat/median_h.hh> -#include <mln/labeling/relabel.hh> +#include <mln/labeling/pack.hh> #include <mln/labeling/mean_values.hh> #include <mln/data/compute.hh> #include <mln/make/image3d.hh> @@ -76,7 +76,7 @@ int main(int argc, char *argv[]) { image2d<int_u12> sli = duplicate(slice(ima, i)); image2d<L> sli_labels = duplicate(slice(ima_labels, i)); - image2d<L> labels = labeling::relabel(sli_labels, nlabels); + image2d<L> labels = labeling::pack(sli_labels, nlabels); mln_VAR(mean_slice, labeling::mean_values(sli, labels, nlabels)); arr.append(mean_slice); } diff --git a/milena/sandbox/fabien/igr/nbasins_finder.cc b/milena/sandbox/fabien/igr/nbasins_finder.cc index f1a4337..a621e2b 100644 --- a/milena/sandbox/fabien/igr/nbasins_finder.cc +++ b/milena/sandbox/fabien/igr/nbasins_finder.cc @@ -25,8 +25,6 @@ #include <mln/morpho/closing/volume.hh> #include <mln/morpho/watershed/flooding.hh> -#include <mln/fun/l2l/wrap.hh> - #include <mln/labeling/colorize.hh> @@ -72,7 +70,7 @@ int main(int argc, char *argv[]) // Visualization std::cout << " nbasins = " << nbasins << std::endl; - //io::dump::save(data::transform(wshed, fun::l2l::wrap<int_u8>()), "result_nbasins.dump"); + //io::dump::save(data::transform(wshed, fun::v2v::wrap<int_u8>()), "result_nbasins.dump"); //io::dump::save(data::stretch(int_u8(), wshed), "result_nbasins.dump"); io::dump::save(labeling::colorize(rgb8(), wshed, nbasins), "result_nbasins.dump"); diff --git a/milena/sandbox/fabien/igr/seg2d.cc b/milena/sandbox/fabien/igr/seg2d.cc index a14e57a..5cc49d8 100644 --- a/milena/sandbox/fabien/igr/seg2d.cc +++ b/milena/sandbox/fabien/igr/seg2d.cc @@ -40,14 +40,14 @@ int main(int argc, char* argv[]) data::fill(ima_thres, false); unsigned threshold_value = find_threshold_value(ima, c4()); std::cout << "double threshold value = " << threshold_value << std::endl; - data::fill((ima_thres | pw::value(ima) < pw::cst(threshold_value)).rw(), true); + data::fill((ima_thres | (pw::value(ima) < pw::cst(threshold_value))).rw(), true); io::pbm::save(ima_thres, "result_double.pbm"); data::fill(ima_thres, false); threshold_value = find_threshold_mean(ima, c4()); std::cout << " deviation threshold value = " << threshold_value << std::endl; - data::fill((ima_thres | pw::value(ima) < pw::cst(threshold_value)).rw(), true); + data::fill((ima_thres | (pw::value(ima) < pw::cst(threshold_value))).rw(), true); io::pbm::save(ima_thres, "result_deviation.pbm"); diff --git a/milena/sandbox/fabien/igr/seg_vol_irm.hh b/milena/sandbox/fabien/igr/seg_vol_irm.hh index 8c1711d..a82beb5 100644 --- a/milena/sandbox/fabien/igr/seg_vol_irm.hh +++ b/milena/sandbox/fabien/igr/seg_vol_irm.hh @@ -186,7 +186,7 @@ find_threshold_value(const Image<I>& input, const Neighborhood<N>& nbh) unsigned result = 0; // We remove the 0 value because it is not part of the image. - histo::array<mln_value(I)> arr_histo = histo::compute(input | pw::value(input) != 0); + histo::array<mln_value(I)> arr_histo = histo::compute(input | (pw::value(input) != 0)); image1d<unsigned> ima_histo; convert::from_to(arr_histo, ima_histo); @@ -205,12 +205,12 @@ find_threshold_value(const Image<I>& input, const Neighborhood<N>& nbh) { if (!low_done && ((ima_histo(point1d(i)) * 100) / max) > bg_thres) { - data::fill((ima_bg | pw::value(input) < pw::cst(i)).rw(), true); + data::fill((ima_bg | (pw::value(input) < pw::cst(i))).rw(), true); low_done = true; } if (!high_done && ((ima_histo(point1d(i)) * 100) / max) > (100 - obj_thres)) { - data::fill((ima_obj | pw::value(input) > pw::cst(i)).rw(), true); + data::fill((ima_obj | (pw::value(input) > pw::cst(i))).rw(), true); high_done = true; } } @@ -246,9 +246,9 @@ find_threshold_value(const Image<I>& input, const Neighborhood<N>& nbh) data::fill((ima_obj | (pw::value(obj_labels) != pw::cst(arr_o_big[1]))).rw(), false);*/ // Debug output images - mln_ch_value(I, rgb8) out = data::convert(rgb8(), level::stretch(int_u8(), input)); - data::fill((out | pw::value(morpho::elementary::gradient_internal(ima_bg, nbh)) == true).rw(), literal::red); - data::fill((out | pw::value(morpho::elementary::gradient_internal(ima_obj, nbh)) == true).rw(), literal::green); + mln_ch_value(I, rgb8) out = data::convert(rgb8(), data::stretch(int_u8(), input)); + data::fill((out | (pw::value(morpho::elementary::gradient_internal(ima_bg, nbh)) == true)).rw(), literal::red); + data::fill((out | (pw::value(morpho::elementary::gradient_internal(ima_obj, nbh)) == true)).rw(), literal::green); save_regions_color(out, metal::int_<I::site::dim>()); if (I::site::dim == 2) { @@ -262,8 +262,8 @@ find_threshold_value(const Image<I>& input, const Neighborhood<N>& nbh) } // Histo - histo::array<mln_value(I)> bg_histo = histo::compute(input | pw::value(ima_bg) == true); - histo::array<mln_value(I)> obj_histo = histo::compute(input | pw::value(ima_obj) == true); + histo::array<mln_value(I)> bg_histo = histo::compute(input | (pw::value(ima_bg) == true)); + histo::array<mln_value(I)> obj_histo = histo::compute(input | (pw::value(ima_obj) == true)); accu::math::sum<unsigned> sum_accu; image1d<unsigned> ima_bg_histo; @@ -313,13 +313,14 @@ template <typename I, typename N> unsigned find_threshold_mean(const Image<I>& input, const Neighborhood<N>& nbh) { + (void) nbh; unsigned coef = 1; accu::stat::mean<unsigned> mean_accu; unsigned mean = data::compute(mean_accu, (input | (pw::value(input) != 0))); accu::stat::deviation<unsigned, unsigned, float> dev_accu(mean); - float deviation = data::compute(dev_accu, (input | pw::value(input) != 0)); + float deviation = data::compute(dev_accu, (input | (pw::value(input) != 0))); std::cout << "[mean = " << mean << " | deviation = " << deviation << "]"; return floor(mean + coef * deviation); diff --git a/milena/sandbox/fabien/igr/watershed2d.cc b/milena/sandbox/fabien/igr/watershed2d.cc index 858236e..09ece2c 100644 --- a/milena/sandbox/fabien/igr/watershed2d.cc +++ b/milena/sandbox/fabien/igr/watershed2d.cc @@ -1,64 +1,51 @@ #include <iostream> -#include <mln/core/image/image2d.hh> + +#include <mln/core/alias/dpoint2d.hh> #include <mln/core/alias/neighb2d.hh> +#include <mln/core/alias/vec3d.hh> #include <mln/core/alias/window2d.hh> #include <mln/core/image/dmorph/image_if.hh> +#include <mln/core/image/image2d.hh> +#include <mln/core/routine/extend.hh> +#include <mln/core/var.hh> -#include <mln/io/ppm/save.hh> -#include <mln/io/ppm/load.hh> -#include <mln/io/pgm/load.hh> -#include <mln/io/dicom/load.hh> -#include <mln/io/pgm/save.hh> -#include <mln/io/dump/save.hh> - -#include <mln/value/rgb8.hh> -#include <mln/value/int_u8.hh> -#include <mln/value/int_u12.hh> -#include <mln/value/label_16.hh> +#include <mln/accu/center.hh> +#include <mln/accu/compute.hh> +#include <mln/convert/to_fun.hh> -#include <mln/data/transform.hh> #include <mln/data/stretch.hh> +#include <mln/data/transform.hh> -#include <mln/labeling/mean_values.hh> +#include <mln/debug/draw_graph.hh> -#include <mln/convert/to_fun.hh> +#include <mln/draw/box.hh> -#include <mln/make/graph.hh> +#include <mln/fun/v2v/id.hh> +#include <mln/fun/v2v/wrap.hh> -#include <mln/morpho/gradient.hh> -#include <mln/morpho/closing/area.hh> -#include <mln/morpho/meyer_wst.hh> +#include <mln/io/dicom/load.hh> +#include <mln/io/dump/save.hh> +#include <mln/io/pgm/all.hh> +#include <mln/io/ppm/all.hh> -#include <mln/fun/l2l/wrap.hh> +#include <mln/labeling/mean_values.hh> -#include <mln/core/var.hh> -#include <mln/morpho/elementary/dilation.hh> +#include <mln/make/region_adjacency_graph.hh> -#include <mln/core/routine/extend.hh> +#include <mln/math/diff_abs.hh> -#include <mln/util/graph.hh> +#include <mln/morpho/closing/area.hh> +#include <mln/morpho/elementary/dilation.hh> +#include <mln/morpho/gradient.hh> +#include <mln/morpho/meyer_wst.hh> -#include <mln/essential/2d.hh> -#include <mln/core/alias/vec3d.hh> -#include <mln/debug/draw_graph.hh> #include <mln/util/graph.hh> -#include <mln/accu/center.hh> -#include <mln/io/dump/all.hh> -#include <mln/value/label_8.hh> -#include <mln/value/rgb16.hh> -#include <mln/accu/compute.hh> -#include <mln/core/alias/dpoint2d.hh> -#include <mln/draw/box.hh> -#include <mln/data/stretch.hh> -#include <mln/fun/v2v/id.hh> -#include <mln/fun/l2l/wrap.hh> -#include <mln/core/image/line_graph_elt_neighborhood.hh> -#include <mln/morpho/elementary/dilation.hh> -#include <mln/labeling/mean_values.hh> -#include <mln/extension/adjust_fill.hh> -#include <mln/extract/all.hh> -#include <mln/make/region_adjacency_graph.hh> + +#include <mln/value/int_u12.hh> +#include <mln/value/int_u8.hh> +#include <mln/value/label_16.hh> +#include <mln/value/rgb8.hh> @@ -268,16 +255,16 @@ int main(int argc, char *argv[]) image2d<label_16> wshed = morpho::meyer_wst(clo, c4(), nbasins); io::pgm::save(data::stretch(int_u8(), clo), "wsd_02.pgm"); - io::pgm::save(data::transform(wshed, fun::l2l::wrap<int_u8>()), "wsd_03.pgm"); + io::pgm::save(data::transform(wshed, fun::v2v::wrap<int_u8>()), "wsd_03.pgm"); mln_VAR(vol2_, morpho::elementary::dilation(extend(wshed | (pw::value(wshed) == 0u), wshed), c8())); data::fill((wshed | (pw::value(wshed) == 0u)).rw(), vol2_); - io::pgm::save(data::transform(wshed, fun::l2l::wrap<int_u8>()), "wsd_04.pgm"); + io::pgm::save(data::transform(wshed, fun::v2v::wrap<int_u8>()), "wsd_04.pgm"); /// Build graph - util::graph g = make::graph(wshed, c4(), nbasins); + util::graph g = make::region_adjacency_graph(wshed, c4(), nbasins); // Build graph images and compute distance values with a RGB image. mln_VAR(ima_v, make_vertex_graph_image(g, dcm, wshed, nbasins)); mln_VAR(ima_e, make_edge_graph_image(ima_v, g)); @@ -311,10 +298,10 @@ int main(int argc, char *argv[]) --nbasins2; // nbasins2 does not count the basin with label 0. image2d<label_16> wsd2 = data::transform(wshed, f); - io::pgm::save(data::transform(wsd2, fun::l2l::wrap<int_u8>()), "wsd_05.pgm"); + io::pgm::save(data::transform(wsd2, fun::v2v::wrap<int_u8>()), "wsd_05.pgm"); /// Reconstruct a graph from the simplified image. - util::graph g2 = make::graph(wsd2, c4(), nbasins2); + util::graph g2 = make::region_adjacency_graph(wsd2, c4(), nbasins2); // Compute distance values with a RGB image. mln_VAR(ima_v2, make_vertex_graph_image(g2, dcm, wsd2, nbasins2)); @@ -324,8 +311,8 @@ int main(int argc, char *argv[]) data::fill((wsd2 | (pw::value(wsd2) == 0u)).rw(), wsd2_); - io::pgm::save(data::transform(labeling::mean_values(dcm, wsd2, nbasins2), fun::l2l::wrap<int_u8>()), "wsd_06_mean_colors.pgm"); + io::pgm::save(data::transform(labeling::mean_values(dcm, wsd2, nbasins2), fun::v2v::wrap<int_u8>()), "wsd_06_mean_colors.pgm"); io::pgm::save(data::stretch(int_u8(), make_debug_graph_image(dcm, ima_v2, ima_e2, box_size, 4095)), "wsd_07_graph_image2_white.pgm"); io::pgm::save(data::stretch(int_u8(), make_debug_graph_image(dcm, ima_v2, ima_e2, box_size, 0)), "wsd_08_graph_image2_black.pgm"); - io::pgm::save(data::transform(wsd2, fun::l2l::wrap<int_u8>()), "wsd_99_result.pgm"); + io::pgm::save(data::transform(wsd2, fun::v2v::wrap<int_u8>()), "wsd_99_result.pgm"); } diff --git a/milena/sandbox/fabien/igr/watershed3d.cc b/milena/sandbox/fabien/igr/watershed3d.cc index 18d4276..3b38bc3 100644 --- a/milena/sandbox/fabien/igr/watershed3d.cc +++ b/milena/sandbox/fabien/igr/watershed3d.cc @@ -1,69 +1,55 @@ #include <iostream> -#include <mln/core/image/image2d.hh> -#include <mln/core/image/image3d.hh> +#include <mln/core/alias/dpoint2d.hh> #include <mln/core/alias/neighb2d.hh> -#include <mln/core/alias/window2d.hh> #include <mln/core/alias/neighb3d.hh> +#include <mln/core/alias/vec3d.hh> +#include <mln/core/alias/window2d.hh> #include <mln/core/alias/window3d.hh> #include <mln/core/image/dmorph/image_if.hh> +#include <mln/core/image/image2d.hh> +#include <mln/core/image/image3d.hh> +#include <mln/core/routine/extend.hh> +#include <mln/core/var.hh> -#include <mln/io/ppm/save.hh> -#include <mln/io/ppm/load.hh> -#include <mln/io/pgm/load.hh> -#include <mln/io/dicom/load.hh> -#include <mln/io/pgm/save.hh> -#include <mln/io/dump/save.hh> +#include <mln/accu/center.hh> +#include <mln/accu/compute.hh> -#include <mln/value/rgb8.hh> -#include <mln/value/int_u8.hh> -#include <mln/value/int_u12.hh> -#include <mln/value/label_16.hh> -#include <mln/value/label_32.hh> +#include <mln/convert/to_fun.hh> -#include <mln/data/transform.hh> #include <mln/data/stretch.hh> +#include <mln/data/transform.hh> -#include <mln/labeling/mean_values.hh> +#include <mln/debug/draw_graph.hh> -#include <mln/convert/to_fun.hh> +#include <mln/draw/box.hh> -#include <mln/make/graph.hh> +#include <mln/fun/v2v/wrap.hh> +#include <mln/fun/v2v/id.hh> -#include <mln/morpho/elementary/dilation.hh> -#include <mln/morpho/elementary/gradient.hh> -#include <mln/morpho/closing/volume.hh> -#include <mln/morpho/meyer_wst.hh> +#include <mln/io/dicom/load.hh> +#include <mln/io/dump/save.hh> +#include <mln/io/pgm/all.hh> +#include <mln/io/ppm/all.hh> -#include <mln/fun/l2l/wrap.hh> +#include <mln/labeling/mean_values.hh> -#include <mln/core/var.hh> +#include <mln/make/region_adjacency_graph.hh> -#include <mln/core/routine/extend.hh> +#include <mln/morpho/closing/volume.hh> +#include <mln/morpho/elementary/dilation.hh> +#include <mln/morpho/elementary/gradient.hh> +#include <mln/morpho/meyer_wst.hh> #include <mln/util/graph.hh> -#include <mln/essential/2d.hh> -#include <mln/core/alias/vec3d.hh> -#include <mln/debug/draw_graph.hh> -#include <mln/util/graph.hh> -#include <mln/accu/center.hh> -#include <mln/io/dump/all.hh> +#include <mln/value/int_u12.hh> +#include <mln/value/int_u8.hh> +#include <mln/value/label_16.hh> +#include <mln/value/label_32.hh> #include <mln/value/label_8.hh> #include <mln/value/rgb16.hh> -#include <mln/accu/compute.hh> -#include <mln/core/alias/dpoint2d.hh> -#include <mln/draw/box.hh> -#include <mln/data/stretch.hh> -#include <mln/fun/v2v/id.hh> -#include <mln/fun/l2l/wrap.hh> -#include <mln/core/image/line_graph_elt_neighborhood.hh> -#include <mln/morpho/elementary/dilation.hh> -#include <mln/labeling/mean_values.hh> -#include <mln/extension/adjust_fill.hh> -#include <mln/extract/all.hh> -#include <mln/make/region_adjacency_graph.hh> - +#include <mln/value/rgb8.hh> // Given a color image and a wshed image, computes the component graph. @@ -281,12 +267,12 @@ int main(int argc, char *argv[]) // Debug io::dump::save(data::stretch(int_u8(), clo), "wsd_02.dump"); - io::dump::save(data::transform(wshed, fun::l2l::wrap<int_u8>()), "wsd_03.dump"); + io::dump::save(data::transform(wshed, fun::v2v::wrap<int_u8>()), "wsd_03.dump"); //mln_VAR(vol2_, morpho::elementary::dilation(extend(wshed | (pw::value(wshed) == 0u), wshed), c26())); //data::fill((wshed | (pw::value(wshed) == 0u)).rw(), vol2_); - io::dump::save(data::transform(wshed, fun::l2l::wrap<int_u8>()), "wsd_04.dump"); + io::dump::save(data::transform(wshed, fun::v2v::wrap<int_u8>()), "wsd_04.dump"); /// Graph trace::quiet = false; @@ -324,7 +310,7 @@ int main(int argc, char *argv[]) --nbasins2; // nbasins2 does not count the basin with label 0. image3d<label_32> wsd2 = data::transform(wshed, f); - io::dump::save(data::transform(wsd2, fun::l2l::wrap<int_u8>()), "wsd_05.dump"); + io::dump::save(data::transform(wsd2, fun::v2v::wrap<int_u8>()), "wsd_05.dump"); /// Reconstruct a graph from the simplified image. util::graph g2 = make::graph(wsd2, c6(), nbasins2); @@ -337,8 +323,8 @@ int main(int argc, char *argv[]) data::fill((wsd2 | (pw::value(wsd2) == 0u)).rw(), wsd2_); - io::dump::save(data::transform(labeling::mean_values(dcm, wsd2, nbasins2), fun::l2l::wrap<int_u8>()), "wsd_06_mean_colors.dump"); + io::dump::save(data::transform(labeling::mean_values(dcm, wsd2, nbasins2), fun::v2v::wrap<int_u8>()), "wsd_06_mean_colors.dump"); //io::dump::save(data::stretch(int_u8(), make_debug_graph_image(dcm, ima_v2, ima_e2, box_size, 4095)), "wsd_07_graph_image2_white.dump"); //io::dump::save(data::stretch(int_u8(), make_debug_graph_image(dcm, ima_v2, ima_e2, box_size, 0)), "wsd_08_graph_image2_black.dump"); - io::dump::save(data::transform(wsd2, fun::l2l::wrap<int_u8>()), "wsd_99_result.dump");*/ + io::dump::save(data::transform(wsd2, fun::v2v::wrap<int_u8>()), "wsd_99_result.dump");*/ } diff --git a/milena/sandbox/fabien/igr/wst_edges.cc b/milena/sandbox/fabien/igr/wst_edges.cc index 3524ca8..1d7f37f 100644 --- a/milena/sandbox/fabien/igr/wst_edges.cc +++ b/milena/sandbox/fabien/igr/wst_edges.cc @@ -58,7 +58,7 @@ #include "plot_points/int2rgb.hh" -#include <mln/world/inter_pixel/display_region.hh> +#include <mln/world/inter_pixel/display_edge.hh> using namespace mln; -- 1.5.6.5

1 0

4683: Small fixes.
by Guillaume Lazzara 28 Oct '09

28 Oct '09

* mln/accu/count_labels.hh, * mln/labeling/relabel.hh: Disable preconditions related to Symbolic value types. * mln/data/compare.hh: Pass variable with exact type. * mln/geom/max_sli.hh, * mln/geom/min_sli.hh: Use geom::bbox. * mln/io/plot/save.hh: Rename template parameter. * mln/util/set.hh: Reindent header. --- milena/ChangeLog | 17 +++++++++++++++++ milena/mln/accu/count_labels.hh | 4 ++-- milena/mln/data/compare.hh | 2 +- milena/mln/geom/max_sli.hh | 3 ++- milena/mln/geom/min_sli.hh | 3 ++- milena/mln/io/plot/save.hh | 8 ++++---- milena/mln/labeling/relabel.hh | 8 ++++---- milena/mln/util/set.hh | 3 ++- 8 files changed, 34 insertions(+), 14 deletions(-) diff --git a/milena/ChangeLog b/milena/ChangeLog index 8896a5f..6d1aa08 100644 --- a/milena/ChangeLog +++ b/milena/ChangeLog @@ -1,5 +1,22 @@ 2009-10-28 Guillaume Lazzara <z(a)lrde.epita.fr> + Small fixes. + + * mln/accu/count_labels.hh, + * mln/labeling/relabel.hh: Disable preconditions related to + Symbolic value types. + + * mln/data/compare.hh: Pass variable with exact type. + + * mln/geom/max_sli.hh, + * mln/geom/min_sli.hh: Use geom::bbox. + + * mln/io/plot/save.hh: Rename template parameter. + + * mln/util/set.hh: Reindent header. + +2009-10-28 Guillaume Lazzara <z(a)lrde.epita.fr> + Add data::wrap. * mln/data/wrap.hh: New. diff --git a/milena/mln/accu/count_labels.hh b/milena/mln/accu/count_labels.hh index 7a24766..07c48b2 100644 --- a/milena/mln/accu/count_labels.hh +++ b/milena/mln/accu/count_labels.hh @@ -50,8 +50,8 @@ namespace mln // template <typename L> struct count_labels - : public mln::accu::internal::base< unsigned , count_labels<L> >, - mlc_is_a(L, mln::value::Symbolic)::check_t + : public mln::accu::internal::base< unsigned , count_labels<L> > + // mlc_is_a(L, mln::value::Symbolic)::check_t { typedef L argument; diff --git a/milena/mln/data/compare.hh b/milena/mln/data/compare.hh index 30ea9ce..8a55739 100644 --- a/milena/mln/data/compare.hh +++ b/milena/mln/data/compare.hh @@ -95,7 +95,7 @@ namespace mln mln_precondition(lhs.domain() == rhs.domain()); typedef fun::vv2b::eq<mln_value(L), mln_value(R)> F; - bool res = test::predicate(lhs_, rhs_, F()); + bool res = test::predicate(lhs, rhs, F()); trace::exiting("data::compare (==)"); return res; diff --git a/milena/mln/geom/max_sli.hh b/milena/mln/geom/max_sli.hh index c016cbc..b0c541c 100644 --- a/milena/mln/geom/max_sli.hh +++ b/milena/mln/geom/max_sli.hh @@ -32,6 +32,7 @@ # include <mln/core/concept/image.hh> +# include <mln/geom/bbox.hh> namespace mln { @@ -53,7 +54,7 @@ namespace mln trace::entering("mln::geom::max_sli"); mln_precondition(exact(ima).is_valid()); - mln_deduce(I, site, coord) maxsli = exact(ima).bbox().pmax().sli(); + mln_deduce(I, site, coord) maxsli = geom::bbox(ima).pmax().sli(); trace::exiting("mln::geom::max_sli"); return maxsli; diff --git a/milena/mln/geom/min_sli.hh b/milena/mln/geom/min_sli.hh index ecd8857..7b07a8c 100644 --- a/milena/mln/geom/min_sli.hh +++ b/milena/mln/geom/min_sli.hh @@ -32,6 +32,7 @@ # include <mln/core/concept/image.hh> +# include <mln/geom/bbox.hh> namespace mln { @@ -53,7 +54,7 @@ namespace mln trace::entering("mln::geom::min_sli"); mln_precondition(exact(ima).is_valid()); - mln_deduce(I, site, coord) minsli = exact(ima).bbox().pmin().sli(); + mln_deduce(I, site, coord) minsli = geom::bbox(ima).pmin().sli(); trace::exiting("mln::geom::min_sli"); return minsli; diff --git a/milena/mln/io/plot/save.hh b/milena/mln/io/plot/save.hh index 1a01267..8010afa 100644 --- a/milena/mln/io/plot/save.hh +++ b/milena/mln/io/plot/save.hh @@ -57,8 +57,8 @@ namespace mln \param[out] filename The output file. \param[in] start_value The start index value of the plot (optional). */ - template <typename I> - void save(util::array<I>& arr, + template <typename T> + void save(util::array<T>& arr, const std::string& filename, int start_value = 0); @@ -82,9 +82,9 @@ namespace mln trace::exiting("mln::io::plot::save"); } - template <typename I> + template <typename T> inline - void save(const util::array<I>& arr, const std::string& filename, + void save(const util::array<T>& arr, const std::string& filename, int start_value = 0) { trace::entering("mln::io::plot::save"); diff --git a/milena/mln/labeling/relabel.hh b/milena/mln/labeling/relabel.hh index b8ebc12..dfb35fb 100644 --- a/milena/mln/labeling/relabel.hh +++ b/milena/mln/labeling/relabel.hh @@ -120,7 +120,7 @@ namespace mln mln_value(I)& new_nlabels) { // FIXME: we may want to check that it is exactly a label. - mlc_is_a(mln_value(I), mln::value::Symbolic)::check(); +// mlc_is_a(mln_value(I), mln::value::Symbolic)::check(); mln_precondition(exact(label).is_valid()); (void) label; (void) new_nlabels; @@ -134,7 +134,7 @@ namespace mln const Function<F>& f) { // FIXME: we may want to check that it is exactly a label. - mlc_is_a(mln_value(I), mln::value::Symbolic)::check(); +// mlc_is_a(mln_value(I), mln::value::Symbolic)::check(); mln_precondition(exact(label).is_valid()); (void) label; (void) nlabels; @@ -149,7 +149,7 @@ namespace mln const Function<F>& f) { // FIXME: we may want to check that it is exactly a label. - mlc_is_a(mln_value(I), mln::value::Symbolic)::check(); +// mlc_is_a(mln_value(I), mln::value::Symbolic)::check(); mln_precondition(exact(label).is_valid()); (void) label; (void) nlabels; @@ -164,7 +164,7 @@ namespace mln const Function<F>& f) { // FIXME: we may want to check that it is exactly a label. - mlc_is_a(mln_value(I), mln::value::Symbolic)::check(); +// mlc_is_a(mln_value(I), mln::value::Symbolic)::check(); mln_precondition(exact(label).is_valid()); (void) label; (void) nlabels; diff --git a/milena/mln/util/set.hh b/milena/mln/util/set.hh index 29c6ea6..d9e91e2 100644 --- a/milena/mln/util/set.hh +++ b/milena/mln/util/set.hh @@ -1,4 +1,5 @@ -// Copyright (C) 2007, 2008, 2009 EPITA Research and Development Laboratory (LRDE) +// Copyright (C) 2007, 2008, 2009 EPITA Research and Development +// Laboratory (LRDE) // // This file is part of Olena. // -- 1.5.6.5

1 0

4682: Add data::wrap.
by Guillaume Lazzara 28 Oct '09

28 Oct '09

* mln/data/wrap.hh: New. * mln/data/all.hh: Include this new file. --- milena/ChangeLog | 8 +++ milena/mln/data/all.hh | 1 + milena/mln/data/{all.hh => wrap.hh} | 90 +++++++++++++++++++--------------- 3 files changed, 59 insertions(+), 40 deletions(-) copy milena/mln/data/{all.hh => wrap.hh} (50%) diff --git a/milena/ChangeLog b/milena/ChangeLog index b6f9ce4..8896a5f 100644 --- a/milena/ChangeLog +++ b/milena/ChangeLog @@ -1,3 +1,11 @@ +2009-10-28 Guillaume Lazzara <z(a)lrde.epita.fr> + + Add data::wrap. + + * mln/data/wrap.hh: New. + + * mln/data/all.hh: Include this new file. + 2009-10-22 Guillaume Lazzara <z(a)lrde.epita.fr> Small fixes. diff --git a/milena/mln/data/all.hh b/milena/mln/data/all.hh index bc77272..de00450 100644 --- a/milena/mln/data/all.hh +++ b/milena/mln/data/all.hh @@ -72,6 +72,7 @@ namespace mln //<<lrde # include <mln/data/was.median.hh> //>> +# include <mln/data/wrap.hh> diff --git a/milena/mln/data/all.hh b/milena/mln/data/wrap.hh similarity index 50% copy from milena/mln/data/all.hh copy to milena/mln/data/wrap.hh index bc77272..1e30f04 100644 --- a/milena/mln/data/all.hh +++ b/milena/mln/data/wrap.hh @@ -1,5 +1,4 @@ -// Copyright (C) 2007, 2008, 2009 EPITA Research and Development -// Laboratory (LRDE) +// Copyright (C) 2009 EPITA Research and Development Laboratory (LRDE) // // This file is part of Olena. // @@ -24,55 +23,66 @@ // exception does not however invalidate any other reasons why the // executable file might be covered by the GNU General Public License. -#ifndef MLN_DATA_ALL_HH -# define MLN_DATA_ALL_HH +#ifndef MLN_DATA_WRAP_HH +# define MLN_DATA_WRAP_HH /// \file /// -/// File that includes all data-related routines. +/// \brief Routine to wrap values such as 0 -> 0 and [1, lmax] maps to [1, +/// Lmax] (using modulus). + + +#include <mln/core/concept/image.hh> + +#include <mln/data/transform.hh> +#include <mln/fun/v2v/wrap.hh> namespace mln { - /// Namespace of image processing routines related to pixel data. namespace data { - /// Implementation namespace of data namespace. - namespace impl { + /*! \brief Routine to wrap values such as 0 -> 0 and [1, lmax] maps to [1, + Lmax] (using modulus). + + \param[in] v The target value type. + \param[in] input Input image. + + \return An image with wrapped values. + */ + template <typename V, typename I> + mln_ch_value(I, V) + wrap(const V& v, const Image<I>& input); + + +# ifndef MLN_INCLUDE_ONLY + - /// Generic implementation namespace of data namespace. - namespace generic {} + template <typename V, typename I> + mln_ch_value(I, V) + wrap(const V& v, const Image<I>& input_) + { + trace::entering("mln::data::wrap"); + (void) v; + const I& input = exact(input_); + + mln_precondition(input.is_valid()); + + mln_ch_value(I, V) + output = data::transform(input, fun::v2v::wrap<V>()); + + trace::exiting("mln::data::wrap"); + return output; } - } -} - - -# include <mln/data/abs.hh> -# include <mln/data/apply.hh> -# include <mln/data/approx/all.hh> -# include <mln/data/compare.hh> -# include <mln/data/compute.hh> -# include <mln/data/convert.hh> -# include <mln/data/fast_median.hh> -# include <mln/data/fill.hh> -# include <mln/data/median.hh> -# include <mln/data/naive/all.hh> -# include <mln/data/paste.hh> -# include <mln/data/replace.hh> -# include <mln/data/saturate.hh> -# include <mln/data/sort_offsets.hh> -# include <mln/data/sort_psites.hh> -# include <mln/data/stretch.hh> -# include <mln/data/to_enc.hh> -# include <mln/data/transform.hh> -# include <mln/data/update.hh> -//<<lrde -# include <mln/data/was.median.hh> -//>> - - - -#endif // ! MLN_DATA_ALL_HH + +# endif // ! MLN_INCLUDE_ONLY + + } // end of namespace mln::data + +} // end of namespace mln + + +#endif // ! MLN_DATA_WRAP_HH -- 1.5.6.5

1 0

4681: Update IGR's GUI.
by Guillaume Lazzara 28 Oct '09

28 Oct '09

* demo.pro: Include new files. * src/display.cc, * src/display.hh, * ui/display.ui: New tab widget. * src/display_seg.cc, * src/display_seg.hh: Improve display. * src/edit_seg.cc, * src/edit_seg.hh: Improve segmentation editing. * src/widgets.cc: Include new file. * ui/main_window.ui: Add a new tab. --- milena/sandbox/ChangeLog | 20 +++ milena/sandbox/lazzara/igr/gui/demo.pro | 4 +- .../igr/gui/src/{display_seg.cc => display.cc} | 55 ++------- .../igr/gui/src/{display_seg.hh => display.hh} | 20 +-- milena/sandbox/lazzara/igr/gui/src/display_seg.cc | 8 +- milena/sandbox/lazzara/igr/gui/src/display_seg.hh | 3 +- milena/sandbox/lazzara/igr/gui/src/edit_seg.cc | 128 +++++++++++++------ milena/sandbox/lazzara/igr/gui/src/edit_seg.hh | 17 ++- milena/sandbox/lazzara/igr/gui/src/widgets.cc | 1 + milena/sandbox/lazzara/igr/gui/ui/display.ui | 88 ++++++++++++++ milena/sandbox/lazzara/igr/gui/ui/main_window.ui | 21 +++- scribo/headers.mk | 7 +- 12 files changed, 248 insertions(+), 124 deletions(-) copy milena/sandbox/lazzara/igr/gui/src/{display_seg.cc => display.cc} (70%) copy milena/sandbox/lazzara/igr/gui/src/{display_seg.hh => display.hh} (82%) create mode 100644 milena/sandbox/lazzara/igr/gui/ui/display.ui diff --git a/milena/sandbox/ChangeLog b/milena/sandbox/ChangeLog index 94935e2..08e7332 100644 --- a/milena/sandbox/ChangeLog +++ b/milena/sandbox/ChangeLog @@ -1,3 +1,23 @@ +2009-10-28 Guillaume Lazzara <z(a)lrde.epita.fr> + + Update IGR's GUI. + + * demo.pro: Include new files. + + * src/display.cc, + * src/display.hh, + * ui/display.ui: New tab widget. + + * src/display_seg.cc, + * src/display_seg.hh: Improve display. + + * src/edit_seg.cc, + * src/edit_seg.hh: Improve segmentation editing. + + * src/widgets.cc: Include new file. + + * ui/main_window.ui: Add a new tab. + 2009-10-28 Thierry Geraud <thierry.geraud(a)lrde.epita.fr> Add the reconstruction on set by union-find canvas. diff --git a/milena/sandbox/lazzara/igr/gui/demo.pro b/milena/sandbox/lazzara/igr/gui/demo.pro index 5d1b3b0..26e1a06 100644 --- a/milena/sandbox/lazzara/igr/gui/demo.pro +++ b/milena/sandbox/lazzara/igr/gui/demo.pro @@ -11,6 +11,6 @@ LIBS += -L/lrde/dev/linux-x86/stable/gdcm/lib -lgdcmCommon -lgdcmDICT -lgdcmDSED #CONFIG += debug # Input -HEADERS += src/main_window.hh src/image_viewer.hh src/display_seg.hh src/edit_seg.hh src/internal/interactive_scene.hh -FORMS += ui/main_window.ui ui/image_viewer.ui ui/display_seg.ui ui/edit_seg.ui +HEADERS += src/main_window.hh src/image_viewer.hh src/display_seg.hh src/edit_seg.hh src/internal/interactive_scene.hh src/display.hh +FORMS += ui/main_window.ui ui/image_viewer.ui ui/display_seg.ui ui/edit_seg.ui ui/display.ui SOURCES += src/main.cc src/main_window.cc src/image_viewer.cc src/widgets.cc src/internal/interactive_scene.cc diff --git a/milena/sandbox/lazzara/igr/gui/src/display_seg.cc b/milena/sandbox/lazzara/igr/gui/src/display.cc similarity index 70% copy from milena/sandbox/lazzara/igr/gui/src/display_seg.cc copy to milena/sandbox/lazzara/igr/gui/src/display.cc index eae64a9..050644d 100644 --- a/milena/sandbox/lazzara/igr/gui/src/display_seg.cc +++ b/milena/sandbox/lazzara/igr/gui/src/display.cc @@ -28,7 +28,7 @@ #include <QtGui> # define INCLUDE_MLN_FILES -#include <src/display_seg.hh> +#include <src/display.hh> #include <src/image_viewer.hh> #include <src/to_qimage.hh> @@ -61,7 +61,7 @@ namespace mln namespace demo { - display_seg::display_seg(QWidget *parent) + display::display(QWidget *parent) : QWidget(parent) { setupUi(this); @@ -70,14 +70,14 @@ namespace mln this, SLOT(compute_image(int))); } - display_seg::~display_seg() + display::~display() { } // Private slots - void display_seg::on_browseBtn_clicked(bool) + void display::on_browseBtn_clicked(bool) { QString filename = QFileDialog::getOpenFileName(this, @@ -89,39 +89,19 @@ namespace mln filepath->setText(filename); } - - void display_seg::on_browseSegBtn_clicked(bool) - { - QString - filename = QFileDialog::getOpenFileName(this, - tr("Open Image."), - QString(), - tr("Images (*.dump)")); - - if (!filename.isEmpty()) - segfilepath->setText(filename); - } - - - void display_seg::compute_image(int sli) + void display::compute_image(int sli) { slice_image<dcm_ima_t> sl_ima = slice(dcm_ima, sli); - mln_piter_(result_t) p(result.domain()); - for_all(p) - result(p).lum() = (sl_ima(p) / static_cast<float>(mln_max(value::int_u8))) / 2.0; - - QImage ima = to_qimage(data::convert(value::rgb8(), result)); + QImage ima = to_qimage(data::convert(value::rgb8(), sl_ima)); viewer->update_image(ima); } - void display_seg::on_loadBtn_clicked(bool) + void display::on_loadBtn_clicked(bool) { load_dicom(filepath->text()); - load_seg(segfilepath->text()); - setup_result(); viewer->set_image_layer_count(geom::nslis(dcm_ima)); } @@ -130,24 +110,7 @@ namespace mln // Private members - void display_seg::setup_result() - { - initialize(result, seg_ima); - mln_piter_(result_t) p(result.domain()); - for_all(p) - { - result(p).hue() = ((seg_ima(p) * 10) % 359) + 1; - result(p).sat() = 1; - } - } - - void display_seg::load_seg(const QString& filename) - { - io::dump::load(seg_ima, filename.toStdString()); - } - - - void display_seg::load_dicom(const QString& filename) + void display::load_dicom(const QString& filename) { image3d<value::int_u12> tmp; io::dicom::load(tmp, filename.toStdString()); @@ -156,7 +119,7 @@ namespace mln template <typename I> - mln_ch_value(I, value::int_u8) display_seg::to_int_u8(const Image<I>& ima_) + mln_ch_value(I, value::int_u8) display::to_int_u8(const Image<I>& ima_) { const I& ima = exact(ima_); mln_precondition(ima.is_valid()); diff --git a/milena/sandbox/lazzara/igr/gui/src/display_seg.hh b/milena/sandbox/lazzara/igr/gui/src/display.hh similarity index 82% copy from milena/sandbox/lazzara/igr/gui/src/display_seg.hh copy to milena/sandbox/lazzara/igr/gui/src/display.hh index c559b0d..a329daf 100644 --- a/milena/sandbox/lazzara/igr/gui/src/display_seg.hh +++ b/milena/sandbox/lazzara/igr/gui/src/display.hh @@ -23,7 +23,7 @@ // exception does not however invalidate any other reasons why the // executable file might be covered by the GNU General Public License. -#ifndef MLN_DEMO_SRC_DISPLAY_SEG_HH +#ifndef MLN_DEMO_SRC_DISPLAY_HH # include <QDir> # include <QTimer> @@ -31,7 +31,7 @@ # include <QProcess> # include <QtGui> # include <QProgressDialog> -# include <ui_display_seg.h> +# include <ui_display.h> # ifndef INCLUDE_MLN_FILES # define MLN_INCLUDE_ONLY @@ -50,29 +50,24 @@ namespace mln namespace demo { - class display_seg : public QWidget, private Ui::DisplaySeg + class display : public QWidget, private Ui::Display { Q_OBJECT typedef image3d<value::int_u8> dcm_ima_t; - typedef image2d<value::int_u16> seg_ima_t; - typedef image2d<value::hsl_f> result_t; public: - display_seg(QWidget *parent = 0); - ~display_seg(); + display(QWidget *parent = 0); + ~display(); private slots: void on_browseBtn_clicked(bool); - void on_browseSegBtn_clicked(bool); void compute_image(int sli); void on_loadBtn_clicked(bool); private: // Members - void setup_result(); - void load_seg(const QString& filename); void load_dicom(const QString& filename); template <typename I> @@ -82,9 +77,6 @@ namespace mln private: // Attributes dcm_ima_t dcm_ima; - seg_ima_t seg_ima; - value::int_u8 nlabels_; - result_t result; }; @@ -93,4 +85,4 @@ namespace mln } // end of namespace mln -#endif // ! MLN_DEMO_SRC_DISPLAY_SEG_HH +#endif // ! MLN_DEMO_SRC_DISPLAY_HH diff --git a/milena/sandbox/lazzara/igr/gui/src/display_seg.cc b/milena/sandbox/lazzara/igr/gui/src/display_seg.cc index eae64a9..9d36ca2 100644 --- a/milena/sandbox/lazzara/igr/gui/src/display_seg.cc +++ b/milena/sandbox/lazzara/igr/gui/src/display_seg.cc @@ -42,7 +42,6 @@ #include <mln/value/hsl.hh> #include <mln/value/rgb8.hh> #include <mln/value/int_u12.hh> -#include <mln/value/int_u8.hh> #include <mln/value/int_u32.hh> #include <mln/value/int_u8.hh> #include <mln/data/convert.hh> @@ -109,7 +108,7 @@ namespace mln mln_piter_(result_t) p(result.domain()); for_all(p) - result(p).lum() = (sl_ima(p) / static_cast<float>(mln_max(value::int_u8))) / 2.0; + result(p).lum() = (sl_ima(p) / static_cast<float>(mln_max(value::int_u8))) * 0.7; QImage ima = to_qimage(data::convert(value::rgb8(), result)); @@ -132,11 +131,12 @@ namespace mln void display_seg::setup_result() { - initialize(result, seg_ima); + slice_image<seg_ima_t> sl_ima = slice(seg_ima, 0); + initialize(result, sl_ima); mln_piter_(result_t) p(result.domain()); for_all(p) { - result(p).hue() = ((seg_ima(p) * 10) % 359) + 1; + result(p).hue() = ((sl_ima(p) * 10) % 359) + 1; result(p).sat() = 1; } } diff --git a/milena/sandbox/lazzara/igr/gui/src/display_seg.hh b/milena/sandbox/lazzara/igr/gui/src/display_seg.hh index c559b0d..45207c0 100644 --- a/milena/sandbox/lazzara/igr/gui/src/display_seg.hh +++ b/milena/sandbox/lazzara/igr/gui/src/display_seg.hh @@ -40,7 +40,6 @@ # include <mln/core/image/image3d.hh> # include <mln/core/image/image2d.hh> # include <mln/value/int_u8.hh> -# include <mln/value/int_u16.hh> # include <mln/value/rgb8.hh> # include <mln/value/hsl.hh> @@ -55,7 +54,7 @@ namespace mln Q_OBJECT typedef image3d<value::int_u8> dcm_ima_t; - typedef image2d<value::int_u16> seg_ima_t; + typedef image3d<value::int_u8> seg_ima_t; typedef image2d<value::hsl_f> result_t; public: diff --git a/milena/sandbox/lazzara/igr/gui/src/edit_seg.cc b/milena/sandbox/lazzara/igr/gui/src/edit_seg.cc index 14e58b5..ef22ba8 100644 --- a/milena/sandbox/lazzara/igr/gui/src/edit_seg.cc +++ b/milena/sandbox/lazzara/igr/gui/src/edit_seg.cc @@ -32,12 +32,14 @@ #include <mln/core/image/image3d.hh> #include <mln/core/image/imorph/labeled_image.hh> +#include <mln/core/image/dmorph/slice_image.hh> #include <mln/core/concept/function.hh> +#include <mln/geom/nslis.hh> + #include <mln/data/wrap.hh> #include <mln/data/transform_inplace.hh> -#include <mln/value/int_u16.hh> #include <mln/value/int_u8.hh> #include <mln/io/ppm/save.hh> @@ -46,9 +48,12 @@ #include <mln/literal/colors.hh> #include <mln/labeling/colorize.hh> +#include <mln/labeling/relabel.hh> #include <mln/fun/v2v/wrap.hh> +#include <mln/accu/stat/max.hh> + namespace mln { @@ -57,23 +62,23 @@ namespace mln // struct merge_component : Function_v2v<merge_component> // { -// typedef value::int_u16 result; +// typedef value::int_u8 result; -// merge_component(const value::int_u16& replaced, -// const value::int_u16& by) +// merge_component(const value::int_u8& replaced, +// const value::int_u8& by) // : replaced_(replaced), by_(by) // { // } -// value::int_u16 operator()(const value::int_u16& v) const +// value::int_u8 operator()(const value::int_u8& v) const // { // if (v == replaced_) // return by_; // return v; // } -// value::int_u16 replaced_; -// value::int_u16 by_; +// value::int_u8 replaced_; +// value::int_u8 by_; // }; // } // end of namespace mln::internal @@ -91,7 +96,7 @@ namespace mln setupUi(this); connect(viewer, SIGNAL(slider_valueChanged(int)), - this, SLOT(compute_image())); + this, SLOT(compute_image(int))); connect(viewer, SIGNAL(mouse_draw_line(const QPointF&, const QPointF&)), this, SLOT(join_components(const QPointF&, const QPointF&))); @@ -102,38 +107,60 @@ namespace mln edit_seg::~edit_seg() { - } void edit_seg::on_browseBtn_clicked(bool) { QString - filename = QFileDialog::getOpenFileName(this, + filename = QFileDialog::getOpenFileName(0, tr("Open Image."), QString(), tr("Images (*.dump)")); if (!filename.isEmpty()) + { filepath->setText(filename); - // Initial load. - image2d<value::int_u16> tmp; - io::dump::load(tmp, filepath->text().toStdString()); - seg_ = labeled_image<image2d<value::int_u16> >(tmp); + // Release memory + seg_.destroy(); + seg_rgb8_.destroy(); + + io::dump::load(seg_, filepath->text().toStdString()); - selected_.resize(seg_.nlabels(), false); + mln_assertion(seg_.is_valid()); - image2d<value::int_u8> tmp2 = data::wrap(value::int_u8(), seg_); - seg_rgb8_ = data::convert(value::rgb8(), tmp2); + nlabels_ = data::compute(accu::meta::stat::max(), seg_); - viewer->set_image_layer_count(1); + fselected_.resize(nlabels_, false); + selected_.clear(); + + seg_rgb8_ = data::convert(value::rgb8(), + data::wrap(value::int_u8(), seg_)); + + viewer->set_image_layer_count(geom::nslis(seg_)); + } } - void edit_seg::compute_image() + void edit_seg::compute_image(int sli) { - QImage ima = to_qimage(seg_rgb8_); + current_sli_ = sli; + + slice_image<image3d<value::int_u8> > sl_ima = slice(seg_, sli); + + bboxes_ = labeling::compute(accu::meta::shape::bbox(), sl_ima, nlabels_); + + + slice_image<image3d<value::rgb8> > sl_ima_rgb = slice(seg_rgb8_, sli); + for (unsigned i = 0; i < selected_.nelements(); ++i) + if (selected_[i] < bboxes_.nelements() + && bboxes_(selected_[i]).is_valid()) + data::fill(((sl_ima_rgb | bboxes_(selected_[i])).rw() + | (pw::value(sl_ima) == pw::cst(selected_[i]))).rw(), + literal::red); + + QImage ima = to_qimage(duplicate(sl_ima_rgb)); viewer->update_image(ima); } @@ -160,42 +187,61 @@ namespace mln void edit_seg::on_saveBtn_clicked(bool) { QString - filename = QFileDialog::getOpenFileName(this, + filename = QFileDialog::getSaveFileName(this, tr("Save Image."), QString(), tr("Images (*.dump)")); + if (!filename.isEmpty()) + { + value::int_u8 new_nlabels; + image3d<value::int_u8> + out = labeling::relabel(seg_, nlabels_, + new_nlabels, fselected_); - image2d<value::int_u16> - out = data::transform(seg_.unmorph_(), selected_); + io::dump::save(out, filename.toStdString()); + } - io::dump::save(out, filename.toStdString()); } void edit_seg::select_component(const QPointF& p) { - point2d - mln_p = point2d(p.y(), p.x()); + point3d + mln_p(current_sli_, p.y(), p.x()); + + slice_image<image3d<value::rgb8> > + sl_ima_rgb = slice(seg_rgb8_, current_sli_); + slice_image<image3d<value::int_u8> > + sl_ima = slice(seg_, current_sli_); - if (seg_.domain().has(mln_p) - && !selected_(seg_(mln_p)) - && seg_(mln_p) != 0) // Not the wsl + if (seg_.domain().has(mln_p)) { - selected_(seg_(mln_p)) = true; - data::fill((seg_rgb8_ | seg_.subdomain(seg_(mln_p))).rw(), - literal::red); + value::int_u8 v = seg_(mln_p); + + if (!fselected_(v) && v != 0) // Not the wsl + { + fselected_(v) = true; + selected_.insert(v); + data::fill(((sl_ima_rgb | bboxes_(v)).rw() + | (pw::value(sl_ima) == pw::cst(v))).rw(), + literal::red); + } + else + { + fselected_(v) = false; + selected_.remove(v); + +// fun::v2v::wrap<value::int_u8> f; +// value::int_u8 v8 = f(v); + value::rgb8 v_rgb(v, v, v); + data::fill(((sl_ima_rgb | bboxes_(v)).rw() + | (pw::value(sl_ima) == pw::cst(v))).rw(), v_rgb); + } } - else - { - selected_(seg_(mln_p)) = false; - value::rgb8 - v = convert::to<value::rgb8>(fun::v2v:wrap<value::int_u8>(seg_(mln_p))); - value::rgb8 v(seg_(mln_p), seg_(mln_p), seg_(mln_p)); - data::fill((seg_rgb8_ | seg_.subdomain(seg_(mln_p))).rw(), v); - } - compute_image(); + saveBtn->setEnabled(selected_.nelements() > 0); + compute_image(current_sli_); } diff --git a/milena/sandbox/lazzara/igr/gui/src/edit_seg.hh b/milena/sandbox/lazzara/igr/gui/src/edit_seg.hh index 0d22db5..708eb2c 100644 --- a/milena/sandbox/lazzara/igr/gui/src/edit_seg.hh +++ b/milena/sandbox/lazzara/igr/gui/src/edit_seg.hh @@ -39,9 +39,10 @@ # include <mln/core/image/image2d.hh> # include <mln/core/image/imorph/labeled_image.hh> -# include <mln/value/int_u16.hh> +# include <mln/value/int_u8.hh> # include <mln/value/rgb8.hh> # include <mln/util/array.hh> +# include <mln/util/set.hh> namespace mln { @@ -61,7 +62,7 @@ namespace mln private slots: void on_browseBtn_clicked(bool); void on_saveBtn_clicked(bool); - void compute_image(); + void compute_image(int sli); void join_components(const QPointF& p1, const QPointF& p2); void select_component(const QPointF& p); @@ -69,9 +70,15 @@ namespace mln private: // Attributes - labeled_image<image2d<value::int_u16> > seg_; - image2d<value::rgb8> seg_rgb8_; - mln::util::array<bool> selected_; + image3d<value::int_u8> seg_; + value::int_u8 nlabels_; + image3d<value::rgb8> seg_rgb8_; + mln::util::array<box2d> bboxes_; + + mln::util::array<bool> fselected_; + mln::util::set<value::int_u8> selected_; + + int current_sli_; }; diff --git a/milena/sandbox/lazzara/igr/gui/src/widgets.cc b/milena/sandbox/lazzara/igr/gui/src/widgets.cc index 5968dc4..0171f61 100644 --- a/milena/sandbox/lazzara/igr/gui/src/widgets.cc +++ b/milena/sandbox/lazzara/igr/gui/src/widgets.cc @@ -1,3 +1,4 @@ // FIXME: UGLY!!! Avoir multiple definition of Milena's code. # include "src/display_seg.cc" # include "src/edit_seg.cc" +# include "src/display.cc" diff --git a/milena/sandbox/lazzara/igr/gui/ui/display.ui b/milena/sandbox/lazzara/igr/gui/ui/display.ui new file mode 100644 index 0000000..7766e27 --- /dev/null +++ b/milena/sandbox/lazzara/igr/gui/ui/display.ui @@ -0,0 +1,88 @@ +<?xml version="1.0" encoding="UTF-8"?> +<ui version="4.0"> + <class>Display</class> + <widget class="QWidget" name="Display"> + <property name="geometry"> + <rect> + <x>0</x> + <y>0</y> + <width>400</width> + <height>300</height> + </rect> + </property> + <property name="windowTitle"> + <string>Form</string> + </property> + <layout class="QGridLayout" name="gridLayout"> + <item row="0" column="0"> + <layout class="QVBoxLayout" name="verticalLayout"> + <item> + <layout class="QHBoxLayout" name="horizontalLayout"> + <item> + <widget class="QLabel" name="label"> + <property name="text"> + <string>Image</string> + </property> + </widget> + </item> + <item> + <widget class="QLineEdit" name="filepath"/> + </item> + <item> + <widget class="QPushButton" name="browseBtn"> + <property name="text"> + <string>&Browse</string> + </property> + </widget> + </item> + </layout> + </item> + <item> + <layout class="QHBoxLayout" name="horizontalLayout_3"> + <item> + <spacer name="horizontalSpacer"> + <property name="orientation"> + <enum>Qt::Horizontal</enum> + </property> + <property name="sizeHint" stdset="0"> + <size> + <width>48</width> + <height>17</height> + </size> + </property> + </spacer> + </item> + <item> + <widget class="QPushButton" name="loadBtn"> + <property name="text"> + <string>&Load</string> + </property> + </widget> + </item> + </layout> + </item> + <item> + <widget class="mln::demo::image_viewer" name="viewer" native="true"> + <property name="sizePolicy"> + <sizepolicy hsizetype="Expanding" vsizetype="Expanding"> + <horstretch>0</horstretch> + <verstretch>0</verstretch> + </sizepolicy> + </property> + </widget> + </item> + </layout> + </item> + </layout> + </widget> + <customwidgets> + <customwidget> + <class>mln::demo::image_viewer</class> + <extends>QWidget</extends> + <header>src/image_viewer.hh</header> + <container>1</container> + </customwidget> + </customwidgets> + <resources/> + <connections/> +</ui> diff --git a/milena/sandbox/lazzara/igr/gui/ui/main_window.ui b/milena/sandbox/lazzara/igr/gui/ui/main_window.ui index 75f3327..bab9d23 100644 --- a/milena/sandbox/lazzara/igr/gui/ui/main_window.ui +++ b/milena/sandbox/lazzara/igr/gui/ui/main_window.ui @@ -15,18 +15,23 @@ <widget class="QWidget" name="centralwidget" > <layout class="QGridLayout" name="gridLayout" > <item row="0" column="0" > - <widget class="QTabWidget" name="tabWidget" > + <widget class="QTabWidget" name="display" > <property name="currentIndex" > <number>0</number> </property> - <widget class="mln::demo::display_seg" name="Visualization" > + <widget class="mln::demo::display" name="display" > <attribute name="title" > - <string>Visualization</string> + <string>Display</string> </attribute> </widget> - <widget class="mln::demo::edit_seg" name="Edition" > + <widget class="mln::demo::display_seg" name="displaySeg" > <attribute name="title" > - <string>Edition</string> + <string>Display segmentation</string> + </attribute> + </widget> + <widget class="mln::demo::edit_seg" name="editSeg" > + <attribute name="title" > + <string>Edit segmentation</string> </attribute> </widget> </widget> @@ -58,6 +63,12 @@ <header>src/edit_seg.hh</header> <container>1</container> </customwidget> + <customwidget> + <class>mln::demo::display</class> + <extends>QWidget</extends> + <header>src/display.hh</header> + <container>1</container> + </customwidget> </customwidgets> <resources/> <connections/> diff --git a/scribo/headers.mk b/scribo/headers.mk index 6c8d0cf..15d9b2a 100644 --- a/scribo/headers.mk +++ b/scribo/headers.mk @@ -24,8 +24,9 @@ nobase_scribo_HEADERS = \ ./draw/bounding_boxes.hh \ ./estim/object_groups_v_thickness.hh \ ./filter/all.hh \ +./filter/common/object_groups_photo.hh \ +./filter/common/object_links_photo.hh \ ./filter/common/objects_photo.hh \ -./filter/object_groups_size_ratio.hh \ ./filter/object_groups_small.hh \ ./filter/object_groups_v_thickness.hh \ ./filter/object_links_bbox_h_ratio.hh \ @@ -37,13 +38,10 @@ nobase_scribo_HEADERS = \ ./filter/object_links_non_aligned_simple.hh \ ./filter/object_links_non_h_aligned.hh \ ./filter/object_links_non_v_aligned.hh \ -./filter/objects_h_thin.hh \ ./filter/objects_large.hh \ -./filter/objects_size_ratio.hh \ ./filter/objects_small.hh \ ./filter/objects_thick.hh \ ./filter/objects_thin.hh \ -./filter/objects_v_thin.hh \ ./fun/v2b/objects_small_filter.hh \ ./make/all.hh \ ./make/debug_filename.hh \ @@ -82,7 +80,6 @@ nobase_scribo_HEADERS = \ ./primitive/internal/find_root.hh \ ./primitive/internal/have_link_valid.hh \ ./primitive/internal/init_link_array.hh \ -./primitive/internal/is_invalid_link.hh \ ./primitive/internal/is_link_valid.hh \ ./primitive/internal/update_graph_link.hh \ ./primitive/internal/update_link_array.hh \ -- 1.5.6.5

1 0

4680: Add the reconstruction on set by union-find canvas.
by Thierry Geraud 28 Oct '09

28 Oct '09

https://svn.lrde.epita.fr/svn/oln/trunk/milena/sandbox Index: ChangeLog from Thierry Geraud <thierry.geraud(a)lrde.epita.fr> Add the reconstruction on set by union-find canvas. * theo/mln/morpho/reconstruction/by_dilation.hh: Layout. * theo/mln/morpho/canvas: New directory. * theo/mln/morpho/canvas/reconstruction_on_set_tiny.cc: New. * theo/mln/morpho/canvas/reconstruction_on_set.hh: New. * theo/mln/morpho/canvas/internal: New directory. * theo/mln/morpho/canvas/internal/find_root.hh: New. * theo/mln/morpho/canvas/reconstruction_on_set.cc: New. canvas/internal/find_root.hh | 89 ++++++++ canvas/reconstruction_on_set.cc | 376 +++++++++++++++++++++++++++++++++++ canvas/reconstruction_on_set.hh | 356 +++++++++++++++++++++++++++++++++ canvas/reconstruction_on_set_tiny.cc | 190 +++++++++++++++++ reconstruction/by_dilation.hh | 2 5 files changed, 1011 insertions(+), 2 deletions(-) Index: theo/mln/morpho/reconstruction/by_dilation.hh --- theo/mln/morpho/reconstruction/by_dilation.hh (revision 4679) +++ theo/mln/morpho/reconstruction/by_dilation.hh (working copy) @@ -656,7 +656,6 @@ } } - // Sequence---Forth. { data::fill(deja_vu, false); @@ -687,7 +686,6 @@ } } - // Propagation. { P p; Index: theo/mln/morpho/canvas/reconstruction_on_set_tiny.cc --- theo/mln/morpho/canvas/reconstruction_on_set_tiny.cc (revision 0) +++ theo/mln/morpho/canvas/reconstruction_on_set_tiny.cc (revision 0) @@ -0,0 +1,190 @@ +#include <mln/core/image/image2d.hh> +#include <mln/core/alias/neighb2d.hh> +#include <mln/debug/println.hh> + +#include "reconstruction_on_set.hh" + + + +template <typename F, typename G> +struct rd_functor +{ + const F& f; + const G& g; + + rd_functor(const F& f, const G& g) + : f(f), g(g) + { + } + + mln_concrete(F) output; + typedef mln_psite(F) P; + + void set_default() + { + mln::data::fill(output, false); + } + + bool domain(const P& p) const + { + return g(p) == true; + } + + void init(const P& p) + { + output(p) = f(p); + } + + void merge(const P& p, const P& r) + { + output(p) = output(p) || output(r); + } + + void border(const P&, const P&) + { + } + + // Fastest versions. + void set_extension_() + { + mln::border::fill(g, false); + } + bool domain_(unsigned p) const + { + return g.element(p) == true; + } + void init_(unsigned p) + { + output.element(p) = f.element(p); + } + void merge_(unsigned p, unsigned r) + { + output.element(p) = output.element(p) || output.element(r); + } + bool inspect_border_() const + { + return false; + } + void border_(unsigned, unsigned) + { + } +}; + + + + + +template <typename F, typename G> +struct rd_alt_functor // /!\ alternative version +{ + const F& f; + const G& g; + + rd_alt_functor(const F& f, const G& g) + : f(f), g(g) + { + } + + mln_concrete(F) output; + typedef mln_psite(F) P; + + void set_default() + { + mln::data::fill(output, f); + } + + bool domain(const P& p) const + { + return g(p) && ! f(p); + } + + void init(const P& p) + { + output(p) = false; + } + + void merge(const P& p, const P& r) + { + output(p) = output(p) || output(r); + } + + void border(const P& p, const P& n) + { + if (f(n)) + output(p) = true; + } + + // Fastest versions. + void set_extension_() + { + mln::border::fill(f, false); + mln::border::fill(g, false); + } + bool domain_(unsigned p) const + { + return g.element(p) && ! f.element(p); + } + void init_(unsigned p) + { + output.element(p) = false; + } + void merge_(unsigned p, unsigned r) + { + output.element(p) = output.element(p) || output.element(r); + } + bool inspect_border_() const + { + return true; + } + void border_(unsigned p, unsigned n) + { + if (f.element(n)) + { + mln_invariant(f.domain().has(f.point_at_index(n))); + output.element(p) = true; + } + } +}; + + + + + +int main() +{ + using namespace mln; + + typedef image2d<bool> I; + + I f, g, o; + neighb2d nbh = c4(); + + bool gvals[9][5] = { { 0, 1, 1, 1, 0 }, + { 0, 0, 0, 1, 0 }, + { 0, 1, 1, 1, 0 }, + { 0, 1, 0, 0, 0 }, + { 0, 1, 1, 1, 0 }, + { 0, 0, 0, 1, 0 }, + { 0, 1, 1, 1, 0 }, + { 0, 1, 0, 0, 0 }, + { 0, 1, 1, 1, 0 } }; + g = make::image(gvals); + debug::println("g", g); + + bool fvals[9][5] = { { 0, 0, 0, 0, 0 }, + { 0, 0, 0, 0, 0 }, + { 0, 0, 0, 0, 0 }, + { 0, 0, 0, 0, 0 }, + { 0, 0, 1, 0, 0 }, + { 0, 0, 0, 0, 0 }, + { 0, 0, 0, 0, 0 }, + { 0, 0, 0, 0, 0 }, + { 0, 0, 0, 0, 0 } }; + f = make::image(fvals); + debug::println("f", f); + + rd_alt_functor<I,I> fun(f, g); + o = morpho::canvas::reconstruction_on_set_union_find(f, g, nbh, fun); + + debug::println("o", o); +} Index: theo/mln/morpho/canvas/reconstruction_on_set.hh --- theo/mln/morpho/canvas/reconstruction_on_set.hh (revision 0) +++ theo/mln/morpho/canvas/reconstruction_on_set.hh (revision 0) @@ -0,0 +1,356 @@ +// Copyright (C) 2009 EPITA Research and Development Laboratory (LRDE) +// +// This file is part of Olena. +// +// Olena is free software: you can redistribute it and/or modify it under +// the terms of the GNU General Public License as published by the Free +// Software Foundation, version 2 of the License. +// +// Olena is distributed in the hope that it will be useful, +// but WITHOUT ANY WARRANTY; without even the implied warranty of +// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU +// General Public License for more details. +// +// You should have received a copy of the GNU General Public License +// along with Olena. If not, see <http://www.gnu.org/licenses/>. +// +// As a special exception, you may use this file as part of a free +// software project without restriction. Specifically, if other files +// instantiate templates or use macros or inline functions from this +// file, or you compile this file and link it with other files to produce +// an executable, this file does not by itself cause the resulting +// executable to be covered by the GNU General Public License. This +// exception does not however invalidate any other reasons why the +// executable file might be covered by the GNU General Public License. + +#ifndef MLN_MORPHO_CANVAS_RECONSTRUCTION_ON_SET_UNION_FIND_HH +# define MLN_MORPHO_CANVAS_RECONSTRUCTION_ON_SET_UNION_FIND_HH + +# include <mln/core/concept/image.hh> +# include <mln/core/concept/neighborhood.hh> +# include <mln/morpho/canvas/internal/find_root.hh> + +# include <mln/data/fill.hh> +# include <mln/border/equalize.hh> +# include <mln/border/fill.hh> + + + +namespace mln +{ + + namespace morpho + { + + namespace canvas + { + + + template <typename I, typename J, typename N, + typename F> + mln_concrete(I) + reconstruction_on_set_union_find(const Image<I>& f, const Image<J>& g, const Neighborhood<N>& nbh, + F& functor); + + + + +# ifndef MLN_INCLUDE_ONLY + + + // Implementations. + + namespace impl + { + + namespace generic + { + + template <typename I, typename J, typename N, + typename F> + inline + mln_concrete(I) + reconstruction_on_set_union_find(const Image<I>& f_, const Image<J>& g_, const Neighborhood<N>& nbh_, + F& functor) + { + trace::entering("morpho::canvas::impl::generic::reconstruction_on_set_union_find"); + + const I& f = exact(f_); + const J& g = exact(g_); + const N& nbh = exact(nbh_); + + typedef mln_psite(I) P; + typedef mln_value(I) V; + + // Auxiliary data. + mln_ch_value(I, bool) deja_vu; + mln_ch_value(I, P) parent; + mln_concrete(I) output; + + // Initialization. + { + initialize(output, f); + functor.output = output; + + initialize(parent, f); + initialize(deja_vu, f); + data::fill(deja_vu, false); + + functor.set_default(); // <-- set_default + } + + // First pass. + { + mln_fwd_piter(I) p(f.domain()); + mln_niter(N) n(nbh, p); + for_all(p) + if (functor.domain(p)) // <-- domain + { + // Make-Set. + parent(p) = p; + functor.init(p); // <-- init + + for_all(n) if (f.domain().has(n)) + { + // See below (*) + if (functor.domain(n)) // <-- domain + { + if (deja_vu(n)) + { + // Do-Union. + P r = internal::find_root(parent, n); + if (r != p) + { + parent(r) = p; + functor.merge(p, r); // <-- merge + } + } + } + else + { + mln_invariant(deja_vu(n) == false); + functor.border(p, n); // <-- border + } + } + deja_vu(p) = true; + } + } + + // Second pass. + { + mln_bkd_piter(I) p(f.domain()); + for_all(p) + if (functor.domain(p)) // <-- domain + if (parent(p) != p) + output(p) = output(parent(p)); + } + + // (*) Technical note. + // n in D' + // | true | false | + // deja_vu(n) +----------+--------------+ + // true | do-union | impossible | + // false | no-op | border(p, n) | + // + // The no-op is sound because /n/ will be processed as a "p in D'" later on. + + trace::exiting("morpho::canvas::impl::generic::reconstruction_on_set_union_find"); + return output; + } + + } // end of namespace morpho::canvas::impl::generic + + + + template <typename I, typename J, typename N, + typename F> + inline + mln_concrete(I) + reconstruction_on_set_union_find_fastest(const Image<I>& f_, const Image<J>& g_, const Neighborhood<N>& nbh_, + F& functor) + { + trace::entering("morpho::canvas::impl::reconstruction_on_set_union_find_fastest"); + + const I& f = exact(f_); + const J& g = exact(g_); + const N& nbh = exact(nbh_); + + typedef mln_psite(I) P; + typedef mln_value(I) V; + + // Auxiliary data. + mln_ch_value(I, bool) deja_vu; + mln_ch_value(I, unsigned) parent; + mln_concrete(I) output; + + // Initialization. + { + border::equalize(f, g, nbh.delta()); + functor.set_extension_(); // <-- set_extension + + initialize(output, f); + functor.output = output; + + initialize(parent, f); + + functor.set_default(); // <-- set_default + } + + util::array<int> dp = negative_offsets_wrt(f, nbh); + const unsigned n_nbhs = dp.nelements(); + + // First pass. + { + mln_fwd_pixter(const I) pxl(f); + for_all(pxl) + { + unsigned p = pxl.offset(); + if (functor.domain_(p)) // <-- domain + { + // Make-Set. + parent.element(p) = p; + functor.init_(p); // <-- init + + // Deja-vu part. + for (unsigned j = 0; j < n_nbhs; ++j) + { + unsigned n = p + dp[j]; + if (functor.domain_(n)) // <-- domain + { + mln_invariant(f.domain().has(f.point_at_index(n))); + // Do-Union. + unsigned r = internal::find_root_fastest(parent, n); + if (r != p) + { + // set_parent, i.e., union + parent.element(r) = p; + functor.merge_(p, r); // <-- merge + } + } + else + functor.border_(p, n); // <-- border + } + + // Non-(deja-vu) part. + if (functor.inspect_border_()) + for (unsigned j = 0; j < n_nbhs; ++j) + { + unsigned n = p - dp[j]; + if (! functor.domain_(n)) // <-- domain + functor.border_(p, n); // <-- border + } + + // (*) Technical note. + // n in D' + // | true | false | + // deja_vu(n) +----------+--------------+ + // true | do-union | border(p, n) | + // false | no-op | border(p, n) | + // + // In this 'fastest' version, deja-vu(n) does not + // mean that n is in D' so we have to handle the + // case "deja_vu(n) and n not in D'". + } + } + } + + // Second pass. + { + mln_bkd_pixter(const I) pxl(f); + for_all(pxl) + { + unsigned p = pxl.offset(); + if (functor.domain_(p)) // <-- domain + if (parent.element(p) != p) + output.element(p) = output.element(parent.element(p)); + } + } + + trace::exiting("morpho::canvas::impl::reconstruction_on_set_union_find_fastest"); + return output; + } + + + } // end of namespace mln::morpho::canvas::impl + + + + // Dispatch. + + namespace internal + { + + template <typename I, typename J, typename N, + typename F> + inline + mln_concrete(I) + reconstruction_on_set_union_find_dispatch(metal::false_, + const Image<I>& f, const Image<J>& g, const Neighborhood<N>& nbh, + F& functor) + { + return impl::generic::reconstruction_on_set_union_find(f, g, nbh, + functor); + } + + template <typename I, typename J, typename N, + typename F> + inline + mln_concrete(I) + reconstruction_on_set_union_find_dispatch(metal::true_, + const Image<I>& f, const Image<J>& g, const Neighborhood<N>& nbh, + F& functor) + { + return impl::reconstruction_on_set_union_find_fastest(f, g, nbh, + functor); + } + + template <typename I, typename J, typename N, + typename F> + inline + mln_concrete(I) + reconstruction_on_set_union_find_dispatch(const Image<I>& f, const Image<J>& g, const Neighborhood<N>& nbh, + F& functor) + { + enum { + is_fastest = (mlc_equal(mln_trait_image_speed(I), + trait::image::speed::fastest)::value && + mlc_equal(mln_trait_image_speed(J), + trait::image::speed::fastest)::value && + mln_is_simple_neighborhood(N)::value) + }; + return reconstruction_on_set_union_find_dispatch(metal::bool_<is_fastest>(), + f, g, nbh, + functor); + } + + } // end of namespace mln::morpho::canvas::internal + + + // Facade. + + template <typename I, typename J, typename N, + typename F> + inline + mln_concrete(I) + reconstruction_on_set_union_find(const Image<I>& f, const Image<J>& g, const Neighborhood<N>& nbh, + F& functor) + { + trace::entering("morpho::canvas::reconstruction_on_set_union_find"); + + mln_concrete(I) output; + output = internal::reconstruction_on_set_union_find_dispatch(f, g, nbh, functor); + + trace::exiting("morpho::canvas::reconstruction_on_set_union_find"); + return output; + } + +# endif // ! MLN_INCLUDE_ONLY + + } // end of namespace mln::morpho::canvas + + } // end of namespace mln::morpho + +} // end of namespace mln + + +#endif // ! MLN_MORPHO_CANVAS_RECONSTRUCTION_ON_SET_UNION_FIND_HH Index: theo/mln/morpho/canvas/internal/find_root.hh --- theo/mln/morpho/canvas/internal/find_root.hh (revision 0) +++ theo/mln/morpho/canvas/internal/find_root.hh (revision 0) @@ -0,0 +1,89 @@ +// Copyright (C) 2009 EPITA Research and Development Laboratory (LRDE) +// +// This file is part of Olena. +// +// Olena is free software: you can redistribute it and/or modify it under +// the terms of the GNU General Public License as published by the Free +// Software Foundation, version 2 of the License. +// +// Olena is distributed in the hope that it will be useful, +// but WITHOUT ANY WARRANTY; without even the implied warranty of +// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU +// General Public License for more details. +// +// You should have received a copy of the GNU General Public License +// along with Olena. If not, see <http://www.gnu.org/licenses/>. +// +// As a special exception, you may use this file as part of a free +// software project without restriction. Specifically, if other files +// instantiate templates or use macros or inline functions from this +// file, or you compile this file and link it with other files to produce +// an executable, this file does not by itself cause the resulting +// executable to be covered by the GNU General Public License. This +// exception does not however invalidate any other reasons why the +// executable file might be covered by the GNU General Public License. + +#ifndef MLN_MORPHO_CANVAS_INTERNAL_FIND_ROOT_HH +# define MLN_MORPHO_CANVAS_INTERNAL_FIND_ROOT_HH + +# include <mln/core/concept/image.hh> + + + +namespace mln +{ + + namespace morpho + { + + namespace canvas + { + + namespace internal + { + + template <typename Par> + mln_psite(Par) + find_root(Par& parent, mln_psite(Par) x); + + template <typename Par> + unsigned + find_root_fastest(Par& parent, unsigned x); + + +# ifndef MLN_INCLUDE_ONLY + + template <typename Par> + inline + mln_psite(Par) + find_root(Par& parent, mln_psite(Par) x) + { + if (parent(x) == x) + return x; + else + return parent(x) = find_root(parent, parent(x)); + } + + template <typename Par> + inline + unsigned + find_root_fastest(Par& parent, unsigned x) + { + if (parent.element(x) == x) + return x; + else + return parent.element(x) = find_root_fastest(parent, parent.element(x)); + } + + } // end of namespace mln::morpho::canvas::internal + +# endif // ! MLN_INCLUDE_ONLY + + } // end of namespace mln::morpho::canvas + + } // end of namespace mln::morpho + +} // end of namespace mln + + +#endif // ! MLN_MORPHO_CANVAS_INTERNAL_FIND_ROOT_HH Index: theo/mln/morpho/canvas/reconstruction_on_set.cc --- theo/mln/morpho/canvas/reconstruction_on_set.cc (revision 0) +++ theo/mln/morpho/canvas/reconstruction_on_set.cc (revision 0) @@ -0,0 +1,376 @@ +#include <mln/core/image/image2d.hh> +#include <mln/core/alias/neighb2d.hh> +#include <mln/debug/println.hh> +#include <mln/io/pbm/load.hh> +#include <mln/io/pbm/save.hh> +#include <mln/data/compare.hh> +#include <mln/util/timer.hh> + +#include "reconstruction_on_set.hh" + + +// by_dilation + +template <typename F, typename G> +struct rd_functor +{ + const F& f; + const G& g; + + rd_functor(const F& f, const G& g) + : f(f), g(g) + { + } + + mln_concrete(F) output; + typedef mln_psite(F) P; + + void set_default() + { + mln::data::fill(output, false); + } + + bool domain(const P& p) const + { + return g(p) == true; + } + + void init(const P& p) + { + output(p) = f(p); + } + + void merge(const P& p, const P& r) + { + output(p) = output(p) || output(r); + } + + void border(const P&, const P&) + { + } + + // Fastest versions. + void set_extension_() + { + mln::border::fill(g, false); + } + bool domain_(unsigned p) const + { + return g.element(p) == true; + } + void init_(unsigned p) + { + output.element(p) = f.element(p); + } + void merge_(unsigned p, unsigned r) + { + output.element(p) = output.element(p) || output.element(r); + } + bool inspect_border_() const + { + return false; + } + void border_(unsigned, unsigned) + { + } +}; + + + + + +template <typename F, typename G> +struct rd_alt_functor // /!\ alternative version +{ + const F& f; + const G& g; + + rd_alt_functor(const F& f, const G& g) + : f(f), g(g) + { + } + + mln_concrete(F) output; + typedef mln_psite(F) P; + + void set_default() + { + mln::data::fill(output, f); + } + + bool domain(const P& p) const + { + return g(p) && ! f(p); + } + + void init(const P& p) + { + output(p) = false; + } + + void merge(const P& p, const P& r) + { + output(p) = output(p) || output(r); + } + + void border(const P& p, const P& n) + { + if (f(n)) + output(p) = true; + } + + // Fastest versions. + void set_extension_() + { + mln::border::fill(f, false); + mln::border::fill(g, false); + } + bool domain_(unsigned p) const + { + return g.element(p) && ! f.element(p); + } + void init_(unsigned p) + { + output.element(p) = false; + } + void merge_(unsigned p, unsigned r) + { + output.element(p) = output.element(p) || output.element(r); + } + bool inspect_border_() const + { + return true; + } + void border_(unsigned p, unsigned n) + { + if (f.element(n)) + { + mln_invariant(f.domain().has(f.point_at_index(n))); + output.element(p) = true; + } + } +}; + + + +// by_erosion + +template <typename F, typename G> +struct re_functor +{ + const F& f; + const G& g; + + re_functor(const F& f, const G& g) + : f(f), g(g) + { + } + + mln_concrete(F) output; + typedef mln_psite(F) P; + + void set_default() + { + mln::data::fill(output, true); + } + + bool domain(const P& p) const + { + return g(p) == false; + } + + void init(const P& p) + { + output(p) = f(p); + } + + void merge(const P& p, const P& r) + { + output(p) = output(p) && output(r); + } + + void border(const P&, const P&) + { + } + + // Fastest versions. + void set_extension_() + { + mln::border::fill(g, true); + } + bool domain_(unsigned p) const + { + return g.element(p) == false; + } + void init_(unsigned p) + { + output.element(p) = f.element(p); + } + void merge_(unsigned p, unsigned r) + { + output.element(p) = output.element(p) && output.element(r); + } + bool inspect_border_() const + { + return false; + } + void border_(unsigned, unsigned) + { + } +}; + + + + +template <typename F, typename G> +struct re_alt_functor +{ + const F& f; + const G& g; + + re_alt_functor(const F& f, const G& g) + : f(f), g(g) + { + } + + mln_concrete(F) output; + typedef mln_psite(F) P; + + void set_default() + { + mln::data::fill(output, g); + } + + bool domain(const P& p) const + { + return f(p) && ! g(p); + } + + void init(const P& p) + { + output(p) = true; + } + + void merge(const P& p, const P& r) + { + output(p) = output(p) && output(r); + } + + void border(const P& p, const P& n) + { + if (! f(n)) + output(p) = false; + } + + // Fastest versions. + void set_extension_() + { + mln::border::fill(f, true); + mln::border::fill(g, true); + } + bool domain_(unsigned p) const + { + return f.element(p) && ! g.element(p); + } + void init_(unsigned p) + { + output.element(p) = true; + } + void merge_(unsigned p, unsigned r) + { + output.element(p) = output.element(p) && output.element(r); + } + bool inspect_border_() const + { + return true; + } + void border_(unsigned p, unsigned n) + { + if (! f.element(n)) + output.element(p) = false; + } +}; + + + + +int main() +{ + using namespace mln; + + typedef image2d<bool> I; + + I f, g, ref, o; + neighb2d nbh = c4(); + + io::pbm::load(f, "f_and_g.pbm"); + io::pbm::load(g, "g.pbm"); + + util::timer t; + + + // by dilation + { + rd_functor<I,I> fun(f, g); + { + t.start(); + ref = morpho::canvas::impl::generic::reconstruction_on_set_union_find(f, g, nbh, fun); + std::cout << t.stop() << std::endl; + } + { + t.start(); + o = morpho::canvas::impl::reconstruction_on_set_union_find_fastest(f, g, nbh, fun); + std::cout << t.stop() << std::endl; + std::cout << (o == ref ? "OK" : "KO") << std::endl; + } + + rd_alt_functor<I,I> fun_alt(f, g); + { + t.start(); + o = morpho::canvas::impl::generic::reconstruction_on_set_union_find(f, g, nbh, fun_alt); + std::cout << t.stop() << std::endl; + std::cout << (o == ref ? "OK" : "KO") << std::endl; + } + { + t.start(); + o = morpho::canvas::impl::reconstruction_on_set_union_find_fastest(f, g, nbh, fun_alt); + std::cout << t.stop() << std::endl; + std::cout << (o == ref ? "OK" : "KO") << std::endl; + } + + io::pbm::save(ref, "rd.pbm"); + } + + // by erosion + { + re_functor<I,I> fun(g, f); + { + t.start(); + ref = morpho::canvas::impl::generic::reconstruction_on_set_union_find(g, f, nbh, fun); + std::cout << t.stop() << std::endl; + } + { + t.start(); + o = morpho::canvas::impl::reconstruction_on_set_union_find_fastest(g, f, nbh, fun); + std::cout << t.stop() << std::endl; + std::cout << (o == ref ? "OK" : "KO") << std::endl; + } + + re_alt_functor<I,I> fun_alt(g, f); + { + t.start(); + o = morpho::canvas::impl::generic::reconstruction_on_set_union_find(g, f, nbh, fun_alt); + std::cout << t.stop() << std::endl; + std::cout << (o == ref ? "OK" : "KO") << std::endl; + } + { + t.start(); + o = morpho::canvas::impl::reconstruction_on_set_union_find_fastest(g, f, nbh, fun_alt); + std::cout << t.stop() << std::endl; + std::cout << (o == ref ? "OK" : "KO") << std::endl; + } + + io::pbm::save(ref, "re.pbm"); + } + +}

1 0

4679: Add a GUI for IGR.
by Guillaume Lazzara 28 Oct '09

28 Oct '09

* Makefile.am, * demo.pro, * src/bak/mainwindow.cc, * src/bak/mainwindow.hh, * src/display_seg.cc, * src/display_seg.hh, * src/edit_seg.cc, * src/edit_seg.hh, * src/image_viewer.cc, * src/image_viewer.hh, * src/internal/interactive_scene.cc, * src/internal/interactive_scene.hh, * src/main.cc, * src/main_window.cc, * src/main_window.hh, * src/to_qimage.hh, * src/widgets.cc, * ui/bak/mainwindow.ui, * ui/display_seg.ui, * ui/edit_seg.ui, * ui/image_viewer.ui, * ui/main_window.ui, * ui_display_seg.h, * ui_edit_seg.h, * ui_image_viewer.h, * ui_main_window.h: New files. --- milena/sandbox/ChangeLog | 31 ++ milena/sandbox/lazzara/igr/gui/Makefile.am | 11 + milena/sandbox/lazzara/igr/gui/demo.pro | 16 + .../sandbox/lazzara/igr/gui/src/bak/mainwindow.cc | 441 ++++++++++++++++++++ .../sandbox/lazzara/igr/gui/src/bak/mainwindow.hh | 146 +++++++ milena/sandbox/lazzara/igr/gui/src/display_seg.cc | 172 ++++++++ milena/sandbox/lazzara/igr/gui/src/display_seg.hh | 96 +++++ milena/sandbox/lazzara/igr/gui/src/edit_seg.cc | 204 +++++++++ milena/sandbox/lazzara/igr/gui/src/edit_seg.hh | 82 ++++ milena/sandbox/lazzara/igr/gui/src/image_viewer.cc | 194 +++++++++ milena/sandbox/lazzara/igr/gui/src/image_viewer.hh | 102 +++++ .../igr/gui/src/internal/interactive_scene.cc | 88 ++++ .../igr/gui/src/internal/interactive_scene.hh | 73 ++++ milena/sandbox/lazzara/igr/gui/src/main.cc | 39 ++ milena/sandbox/lazzara/igr/gui/src/main_window.cc | 56 +++ milena/sandbox/lazzara/igr/gui/src/main_window.hh | 60 +++ milena/sandbox/lazzara/igr/gui/src/to_qimage.hh | 63 +++ milena/sandbox/lazzara/igr/gui/src/widgets.cc | 3 + .../sandbox/lazzara/igr/gui/ui/bak/mainwindow.ui | 277 ++++++++++++ milena/sandbox/lazzara/igr/gui/ui/display_seg.ui | 108 +++++ milena/sandbox/lazzara/igr/gui/ui/edit_seg.ui | 97 +++++ milena/sandbox/lazzara/igr/gui/ui/image_viewer.ui | 154 +++++++ milena/sandbox/lazzara/igr/gui/ui/main_window.ui | 64 +++ milena/sandbox/lazzara/igr/gui/ui_display_seg.h | 148 +++++++ milena/sandbox/lazzara/igr/gui/ui_edit_seg.h | 130 ++++++ milena/sandbox/lazzara/igr/gui/ui_image_viewer.h | 167 ++++++++ milena/sandbox/lazzara/igr/gui/ui_main_window.h | 92 ++++ 27 files changed, 3114 insertions(+), 0 deletions(-) create mode 100644 milena/sandbox/lazzara/igr/gui/Makefile.am create mode 100644 milena/sandbox/lazzara/igr/gui/demo.pro create mode 100644 milena/sandbox/lazzara/igr/gui/src/bak/mainwindow.cc create mode 100644 milena/sandbox/lazzara/igr/gui/src/bak/mainwindow.hh create mode 100644 milena/sandbox/lazzara/igr/gui/src/display_seg.cc create mode 100644 milena/sandbox/lazzara/igr/gui/src/display_seg.hh create mode 100644 milena/sandbox/lazzara/igr/gui/src/edit_seg.cc create mode 100644 milena/sandbox/lazzara/igr/gui/src/edit_seg.hh create mode 100644 milena/sandbox/lazzara/igr/gui/src/image_viewer.cc create mode 100644 milena/sandbox/lazzara/igr/gui/src/image_viewer.hh create mode 100644 milena/sandbox/lazzara/igr/gui/src/internal/interactive_scene.cc create mode 100644 milena/sandbox/lazzara/igr/gui/src/internal/interactive_scene.hh create mode 100644 milena/sandbox/lazzara/igr/gui/src/main.cc create mode 100644 milena/sandbox/lazzara/igr/gui/src/main_window.cc create mode 100644 milena/sandbox/lazzara/igr/gui/src/main_window.hh create mode 100644 milena/sandbox/lazzara/igr/gui/src/to_qimage.hh create mode 100644 milena/sandbox/lazzara/igr/gui/src/widgets.cc create mode 100644 milena/sandbox/lazzara/igr/gui/ui/bak/mainwindow.ui create mode 100644 milena/sandbox/lazzara/igr/gui/ui/display_seg.ui create mode 100644 milena/sandbox/lazzara/igr/gui/ui/edit_seg.ui create mode 100644 milena/sandbox/lazzara/igr/gui/ui/image_viewer.ui create mode 100644 milena/sandbox/lazzara/igr/gui/ui/main_window.ui create mode 100644 milena/sandbox/lazzara/igr/gui/ui_display_seg.h create mode 100644 milena/sandbox/lazzara/igr/gui/ui_edit_seg.h create mode 100644 milena/sandbox/lazzara/igr/gui/ui_image_viewer.h create mode 100644 milena/sandbox/lazzara/igr/gui/ui_main_window.h diff --git a/milena/sandbox/ChangeLog b/milena/sandbox/ChangeLog index 9580b1b..53f1bda 100644 --- a/milena/sandbox/ChangeLog +++ b/milena/sandbox/ChangeLog @@ -1,3 +1,34 @@ +2009-10-28 Guillaume Lazzara <z(a)lrde.epita.fr> + + Add a GUI for IGR. + + * Makefile.am, + * demo.pro, + * src/bak/mainwindow.cc, + * src/bak/mainwindow.hh, + * src/display_seg.cc, + * src/display_seg.hh, + * src/edit_seg.cc, + * src/edit_seg.hh, + * src/image_viewer.cc, + * src/image_viewer.hh, + * src/internal/interactive_scene.cc, + * src/internal/interactive_scene.hh, + * src/main.cc, + * src/main_window.cc, + * src/main_window.hh, + * src/to_qimage.hh, + * src/widgets.cc, + * ui/bak/mainwindow.ui, + * ui/display_seg.ui, + * ui/edit_seg.ui, + * ui/image_viewer.ui, + * ui/main_window.ui, + * ui_display_seg.h, + * ui_edit_seg.h, + * ui_image_viewer.h, + * ui_main_window.h: New files. + 2009-10-14 Guillaume Lazzara <z(a)lrde.epita.fr> * lazzara/fonctionnalites_milena.ods: Add a document listing diff --git a/milena/sandbox/lazzara/igr/gui/Makefile.am b/milena/sandbox/lazzara/igr/gui/Makefile.am new file mode 100644 index 0000000..b51084e --- /dev/null +++ b/milena/sandbox/lazzara/igr/gui/Makefile.am @@ -0,0 +1,11 @@ +## Process this file through Automake to create Makefile.in. + +include $(top_srcdir)/scribo/scribo.mk + +.PHONY : demo + +Makefile.demo: + qmake-qt4 $(srcdir)/demo/demo.pro -o Makefile.demo + +demo: Makefile.demo + make -f Makefile.demo all diff --git a/milena/sandbox/lazzara/igr/gui/demo.pro b/milena/sandbox/lazzara/igr/gui/demo.pro new file mode 100644 index 0000000..5d1b3b0 --- /dev/null +++ b/milena/sandbox/lazzara/igr/gui/demo.pro @@ -0,0 +1,16 @@ +###################################################################### +# Automatically generated by qmake (2.01a) Mon Jun 1 10:28:31 2009 +###################################################################### + +TEMPLATE = app +TARGET = +DEPENDPATH += . src ui +INCLUDEPATH += . src $(OLN)/milena /lrde/dev/linux-x86/stable/gdcm/include +DEFINES += NDEBUG +LIBS += -L/lrde/dev/linux-x86/stable/gdcm/lib -lgdcmCommon -lgdcmDICT -lgdcmDSED -lgdcmIOD -lgdcmMSFF -lgdcmexpat -lgdcmjpeg12 -lgdcmjpeg16 -lgdcmjpeg8 -lgdcmopenjpeg -lgdcmuuid -lgdcmzlib +#CONFIG += debug + +# Input +HEADERS += src/main_window.hh src/image_viewer.hh src/display_seg.hh src/edit_seg.hh src/internal/interactive_scene.hh +FORMS += ui/main_window.ui ui/image_viewer.ui ui/display_seg.ui ui/edit_seg.ui +SOURCES += src/main.cc src/main_window.cc src/image_viewer.cc src/widgets.cc src/internal/interactive_scene.cc diff --git a/milena/sandbox/lazzara/igr/gui/src/bak/mainwindow.cc b/milena/sandbox/lazzara/igr/gui/src/bak/mainwindow.cc new file mode 100644 index 0000000..673a01a --- /dev/null +++ b/milena/sandbox/lazzara/igr/gui/src/bak/mainwindow.cc @@ -0,0 +1,441 @@ +// Copyright (C) 2009 EPITA Research and Development Laboratory (LRDE) +// +// This file is part of Olena. +// +// Olena is free software: you can redistribute it and/or modify it under +// the terms of the GNU General Public License as published by the Free +// Software Foundation, version 2 of the License. +// +// Olena is distributed in the hope that it will be useful, +// but WITHOUT ANY WARRANTY; without even the implied warranty of +// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU +// General Public License for more details. +// +// You should have received a copy of the GNU General Public License +// along with Olena. If not, see <http://www.gnu.org/licenses/>. +// +// As a special exception, you may use this file as part of a free +// software project without restriction. Specifically, if other files +// instantiate templates or use macros or inline functions from this +// file, or you compile this file and link it with other files to produce +// an executable, this file does not by itself cause the resulting +// executable to be covered by the GNU General Public License. This +// exception does not however invalidate any other reasons why the +// executable file might be covered by the GNU General Public License. + +#include <QApplication> +#include <QtCore> +#include <QtGui> + +# define INCLUDE_MLN_FILES +#include <src/mainwindow.hh> + +#include <src/image_viewer.hh> + +#include <mln/core/image/dmorph/slice_image.hh> +#include <mln/core/image/image3d.hh> +#include <mln/border/resize.hh> +#include <mln/logical/not.hh> +#include <mln/value/rgb8.hh> +#include <mln/value/int_u12.hh> +#include <mln/value/int_u8.hh> +#include <mln/data/convert.hh> +#include <mln/data/stretch.hh> +#include <mln/io/dicom/all.hh> +#include <mln/io/dump/all.hh> + + +#include <mln/io/ppm/save.hh> + + +const char * modes[][4] = { +// { "Text in pictures", "pics", "../src/text_in_photo_ppm", "image-x-generic.png" }, + { "Segmentation 3d", "seg", "../watershed3d", 0 }, + { 0, 0, 0 } // Empty line, do NOT delete. +}; + + +// Allow to set up to 3 extra arguments to the binaries. +// +// A program will be launched as follow: +// +// ./my_program input.pbm <arg1> <arg2> <arg3> output.ppm +// +// Unused arguments are set to 0. +// Each line must be mapped to the related on in the previous +// array "modes". So DO preserve the order. +// +const char *args_list[][3] = { + { "51", 0, 0 } + // Not empty line needed. +}; + + + +namespace mln +{ + + namespace demo + { + + MainWindow::MainWindow(QWidget *parent) + : QMainWindow(parent) + { + setupUi(this); + + viewer_ = new image_viewer(); + gridLayout_2->addWidget(viewer_, 0, 0); + + unsigned nmodes = 0; + for (unsigned i = 0; modes[i][0] != 0; ++i) + ++nmodes; + + cached_result_.resize(nmodes); + exec_prefix_ = ""; + base_img_dir_ = "/lrde/stockholm/lazzara/svn/olena/git/oln/milena/sandbox/lazzara/igr/gui"; +// QCoreApplication::applicationDirPath(); + + pdialog_.setRange(0,0); + pdialog_.setLabelText(tr("Please wait while computing...")); + pdialog_.setWindowModality(Qt::WindowModal); + + exec_.setReadChannel(QProcess::StandardOutput); + + qDebug() << "Cache located in " << QDir::tempPath(); + + connect(&pdialog_, SIGNAL(canceled()), this, SLOT(compute_canceled())); + + connect(viewer_, SIGNAL(slider_valueChanged(int)), + this, SLOT(compute_image(int))); + + connect_compute_process(); + + // No status bar. + setStatusBar(0); + + initToolBar(); + } + + MainWindow::~MainWindow() + { + for (int i = 0; i < cached_result_.size(); ++i) + foreach(QString value, cached_result_[i]) + { + QFile f(value); + f.remove(); + } + } + + + void MainWindow::set_base_img_dir(const QString& dir) + { + QDir d(dir); + base_img_dir_ = d.absolutePath(); + } + + + void MainWindow::initToolBar() + { + QToolBar *tbar = new QToolBar("Tools"); + tbar->setToolButtonStyle(Qt::ToolButtonTextUnderIcon); + + for (unsigned i = 0; modes[i][0]; ++i) + { + QListWidgetItem *item = new QListWidgetItem(modes[i][0], listWidget); + item->setData(Qt::UserRole, i); + } + + listWidget->setCurrentItem(listWidget->item(0)); + } + + + + void MainWindow::on_browseBtn_clicked(bool) + { + QString + current_dir = mode_ + QString("/"); + + qDebug() << (base_img_dir_ + "/" + current_dir); + QString + filename = QFileDialog::getOpenFileName(this, + tr("Open Image."), + base_img_dir_ + "/" + current_dir, + tr("Images (*.dcm)")); + + prepare_for_run(filename); + } + + void MainWindow::prepare_for_run(const QString& filename) + { + if (!filename.isEmpty()) + { + filepath->setText(filename); + + load_dicom(filename); + + } + } + + void MainWindow::load_dicom(const QString& filename) + { + image3d<value::int_u12> tmp; + io::dicom::load(tmp, filename.toStdString().c_str()); + dcm_ima = to_rgb8(tmp); + + viewer_->set_image_size(geom::nrows(dcm_ima), geom::ncols(dcm_ima), + geom::nslis(dcm_ima)); + } + + + void MainWindow::compute_image(int sli) + { + QImage ima = this->convert(duplicate(slice(dcm_ima, sli))); + viewer_->updated_image(ima); + } + + + template <typename I> + mln_ch_value(I, value::rgb8) MainWindow::to_rgb8(const Image<I>& ima_) + { + const I& ima = exact(ima_); + mln_precondition(ima.is_valid()); + + mln_ch_value(I, value::rgb8) + tmp = data::convert(value::rgb8(), + data::stretch(value::int_u8(), ima)); + + return tmp; + } + + + template <typename I> + QImage MainWindow::convert(const Image<I>& ima_) + { + const I& ima = exact(ima_); + mln_precondition(ima.is_valid()); + + const int + nrows = geom::nrows(ima), + ncols = geom::ncols(ima); + + // Required by a one-shot data copy: + mln::border::resize(ima, 0); + + QImage qima(ncols, nrows, QImage::Format_RGB888); + std::memcpy(qima.scanLine(0), + ima.buffer(), + ima.nelements() * 3); + return qima; + } + + + void MainWindow::on_runBtn_clicked() + { +// if (useCache->isChecked() +// && cached_result_[mode_].contains(filepath->text())) +// { +// last_output_ = cached_result_[mode_][filepath->text()]; +// exec_finished(0, QProcess::NormalExit); +// return; +// } + + wait_for_result(); + + QStringList args; + + QString input = filepath->text(); + + args << input; + for (int i = 0; i < args_values_.size(); ++i) + args << QString::number(args_values_[i]->value()); + + QTemporaryFile f; + f.open(); + args << f.fileName(); + last_output_ = f.fileName(); + qDebug() << last_output_; + + + qDebug() << exec_prefix_ + modes[mode_][2] + << " - " + << args; + exec_.start(exec_prefix_ + modes[mode_][2], args); + } + + + void MainWindow::on_listWidget_currentItemChanged(QListWidgetItem *current, + QListWidgetItem *previous) + { + (void) previous; + mode_ = current->data(Qt::UserRole).toInt(); + update_options(current); + } + + + void MainWindow::update_options(QListWidgetItem */*current*/) + { + QFormLayout *formLayout = new QFormLayout; + + QProcess process; + process.start(modes[mode_][2]); + process.waitForFinished(); + + QByteArray usage = process.readAllStandardOutput(); + QList<QByteArray> list = usage.split('<'); + + delete frame->layout(); + args_values_.clear(); + + for (int i = 2; i < list.size() - 1; ++i) + { + args_values_.append(new QSpinBox()); + args_values_.last()->setValue(atoi(args_list[mode_][i - 2])); + formLayout->addRow(list[i].replace('>', ' '), args_values_.last()); + } + + frame->setLayout(formLayout); + } + + + void MainWindow::on_displayBtn_clicked(bool) + { + load_dicom(filepath->text()); + } + + + void MainWindow::on_filepath_textChanged() + { + bool b = !filepath->text().isEmpty(); + + runBtn->setEnabled(b); + displayBtn->setEnabled(b); + } + + + void MainWindow::exec_finished(int rvalue, QProcess::ExitStatus status) + { + pdialog_.hide(); + if (rvalue == 0) + { + if (status != QProcess::CrashExit) + { + if (useCache->isChecked()) + cached_result_[mode_][filepath->text()] = last_output_; + setEnabled(true); + prepare_and_send_result(last_output_); + } + // Else : canceled. + } + else + exec_error(tr("Error during last run.")); + + if (autoDemo->isChecked()) + timer_.start(timeoutDelay->text().toInt() * 1000); + } + + + void MainWindow::prepare_and_send_result(const QString& output) + { + QImage ima(output); + viewer_->updated_image(ima); + } + + void MainWindow::wait_for_result() + { + reset_progress_dialog(); + + pdialog_.show(); + setEnabled(false); + } + + void MainWindow::exec_error(const QString& msg) + { + setEnabled(true); + QMessageBox::critical(0, tr("Error!"), + tr("The result cannot be computed!")); + qDebug() << "exec_error : " << msg; + qDebug() << exec_.readAllStandardOutput(); + } + + void MainWindow::exec_error(QProcess::ProcessError error) + { + if (error == QProcess::FailedToStart) + exec_error(tr("This program does not exist: ") + + exec_prefix_ + modes[mode_][2]); + else + exec_error(tr("The computation stopped.") + + exec_prefix_ + modes[mode_][2]); + } + + + + void MainWindow::compute_canceled() + { + setEnabled(true); + + exec_.disconnect(); + exec_.kill(); + connect_compute_process(); + + } + + + void MainWindow::on_autoDemo_clicked(bool checked) + { + if (checked) + timer_.start(100); + else + timer_.stop(); + } + + + void MainWindow::timer_timeout() + { + update_auto_demo_dir(); + timer_.stop(); + prepare_for_run(demoDir_.absolutePath() + "/" + + demo_files_[demo_index_]); + demo_index_ = (demo_index_ + 1) % demo_files_.size(); + } + + void MainWindow::update_auto_demo_dir() + { +// QString tmp_path = base_img_dir_ + "/" + current_mode(); +// if (demoDir_.path() != tmp_path) +// { +// demoDir_.setPath(tmp_path); +// demo_index_ = 0; +// demo_files_ = demoDir_.entryList(QDir::NoDotAndDotDot | QDir::Files); +// } + } + + + void MainWindow::update_process_status() + { + pdialog_.setLabelText(tr(exec_.readAllStandardOutput())); + } + + + void MainWindow::reset_progress_dialog() + { + pdialog_.reset(); + pdialog_.setLabelText(tr("Please wait while computing...")); + } + + + void MainWindow::connect_compute_process() + { + connect(&exec_, SIGNAL(finished(int, QProcess::ExitStatus)), + this, SLOT(exec_finished(int, QProcess::ExitStatus))); + connect(&exec_, SIGNAL(error(QProcess::ProcessError)), + this, SLOT(exec_error(QProcess::ProcessError))); + connect(&exec_, SIGNAL(readyReadStandardOutput()), + this, SLOT(update_process_status())); + } + + + } // end of namespace scribo::demo + +} // end of namespace scribo + + diff --git a/milena/sandbox/lazzara/igr/gui/src/bak/mainwindow.hh b/milena/sandbox/lazzara/igr/gui/src/bak/mainwindow.hh new file mode 100644 index 0000000..17948e1 --- /dev/null +++ b/milena/sandbox/lazzara/igr/gui/src/bak/mainwindow.hh @@ -0,0 +1,146 @@ +// Copyright (C) 2009 EPITA Research and Development Laboratory (LRDE) +// +// This file is part of Olena. +// +// Olena is free software: you can redistribute it and/or modify it under +// the terms of the GNU General Public License as published by the Free +// Software Foundation, version 2 of the License. +// +// Olena is distributed in the hope that it will be useful, +// but WITHOUT ANY WARRANTY; without even the implied warranty of +// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU +// General Public License for more details. +// +// You should have received a copy of the GNU General Public License +// along with Olena. If not, see <http://www.gnu.org/licenses/>. +// +// As a special exception, you may use this file as part of a free +// software project without restriction. Specifically, if other files +// instantiate templates or use macros or inline functions from this +// file, or you compile this file and link it with other files to produce +// an executable, this file does not by itself cause the resulting +// executable to be covered by the GNU General Public License. This +// exception does not however invalidate any other reasons why the +// executable file might be covered by the GNU General Public License. + +#ifndef MLN_DEMO_SRC_MAINWINDOW_HH + +# include <QDir> +# include <QTimer> +# include <QStringList> +# include <QProcess> +# include <QtGui> +# include <QProgressDialog> +# include <ui_mainwindow.h> + +# ifndef INCLUDE_MLN_FILES +# define MLN_INCLUDE_ONLY +# endif + +# include <mln/core/image/image3d.hh> +# include <mln/value/rgb8.hh> + +namespace mln +{ + + namespace demo + { + + // Forward declaration. + class image_viewer; + + + class MainWindow : public QMainWindow, private Ui::MainWindow + { + Q_OBJECT + + + public: + MainWindow(QWidget *parent = 0); + ~MainWindow(); + + void set_base_img_dir(const QString& dir); + + private slots: + void initToolBar(); + + void on_browseBtn_clicked(bool b); + void on_runBtn_clicked(); + void on_displayBtn_clicked(bool b); + void on_filepath_textChanged(); + void on_autoDemo_clicked(bool checked); + + void exec_finished(int rvalue, QProcess::ExitStatus status); + void exec_error(QProcess::ProcessError error); + + void compute_canceled(); + + void timer_timeout(); + + void update_process_status(); + + void on_listWidget_currentItemChanged(QListWidgetItem *current, + QListWidgetItem *previous); + + void compute_image(int sli); + + private: // Members + + void update_pixmap(QGraphicsView* view, const QString& name = QString()); + + void load_dicom(const QString& filename); + + template <typename I> + mln_ch_value(I, value::rgb8) to_rgb8(const Image<I>& ima_); + + template <typename I> + QImage convert(const Image<I>& ima_); + + void prepare_and_send_result(const QString& output); + + void exec_error(const QString& msg); + + void wait_for_result(); + + void prepare_for_run(const QString& filename); + + void update_auto_demo_dir(); + + void reset_progress_dialog(); + + void connect_compute_process(); + + void update_options(QListWidgetItem *item); + + private: // Attributes + image_viewer *viewer_; + + QString exec_prefix_; + + QString last_output_; + QProcess exec_; + + QProgressDialog pdialog_; + + QString base_img_dir_; + + int mode_; + image3d<value::rgb8> dcm_ima; + QList<QSpinBox*> args_values_; + + + QVector<QHash<QString, QString> > cached_result_; + + /// Related to auto demo. + QTimer timer_; + QDir demoDir_; + unsigned demo_index_; + QStringList demo_files_; + }; + + + } // end of namespace mln::demo + +} // end of namespace mln + +#endif // ! MLN_DEMO_SRC_MAINWINDOW_HH diff --git a/milena/sandbox/lazzara/igr/gui/src/display_seg.cc b/milena/sandbox/lazzara/igr/gui/src/display_seg.cc new file mode 100644 index 0000000..eae64a9 --- /dev/null +++ b/milena/sandbox/lazzara/igr/gui/src/display_seg.cc @@ -0,0 +1,172 @@ +// Copyright (C) 2009 EPITA Research and Development Laboratory (LRDE) +// +// This file is part of Olena. +// +// Olena is free software: you can redistribute it and/or modify it under +// the terms of the GNU General Public License as published by the Free +// Software Foundation, version 2 of the License. +// +// Olena is distributed in the hope that it will be useful, +// but WITHOUT ANY WARRANTY; without even the implied warranty of +// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU +// General Public License for more details. +// +// You should have received a copy of the GNU General Public License +// along with Olena. If not, see <http://www.gnu.org/licenses/>. +// +// As a special exception, you may use this file as part of a free +// software project without restriction. Specifically, if other files +// instantiate templates or use macros or inline functions from this +// file, or you compile this file and link it with other files to produce +// an executable, this file does not by itself cause the resulting +// executable to be covered by the GNU General Public License. This +// exception does not however invalidate any other reasons why the +// executable file might be covered by the GNU General Public License. + +#include <QApplication> +#include <QtCore> +#include <QtGui> + +# define INCLUDE_MLN_FILES +#include <src/display_seg.hh> +#include <src/image_viewer.hh> + +#include <src/to_qimage.hh> + +#include <mln/accu/count_value.hh> +#include <mln/core/image/dmorph/slice_image.hh> +#include <mln/core/image/image3d.hh> +#include <mln/border/resize.hh> +#include <mln/data/compute.hh> +#include <mln/logical/not.hh> +#include <mln/value/hsl.hh> +#include <mln/value/rgb8.hh> +#include <mln/value/int_u12.hh> +#include <mln/value/int_u8.hh> +#include <mln/value/int_u32.hh> +#include <mln/value/int_u8.hh> +#include <mln/data/convert.hh> +#include <mln/data/stretch.hh> +#include <mln/io/dicom/all.hh> +#include <mln/io/dump/all.hh> + + +#include <mln/io/ppm/save.hh> + + + +namespace mln +{ + + namespace demo + { + + display_seg::display_seg(QWidget *parent) + : QWidget(parent) + { + setupUi(this); + + connect(viewer, SIGNAL(slider_valueChanged(int)), + this, SLOT(compute_image(int))); + } + + display_seg::~display_seg() + { + } + + + // Private slots + + void display_seg::on_browseBtn_clicked(bool) + { + QString + filename = QFileDialog::getOpenFileName(this, + tr("Open Image."), + QString(), + tr("Images (*.dcm)")); + + if (!filename.isEmpty()) + filepath->setText(filename); + } + + + void display_seg::on_browseSegBtn_clicked(bool) + { + QString + filename = QFileDialog::getOpenFileName(this, + tr("Open Image."), + QString(), + tr("Images (*.dump)")); + + if (!filename.isEmpty()) + segfilepath->setText(filename); + } + + + void display_seg::compute_image(int sli) + { + slice_image<dcm_ima_t> sl_ima = slice(dcm_ima, sli); + + mln_piter_(result_t) p(result.domain()); + for_all(p) + result(p).lum() = (sl_ima(p) / static_cast<float>(mln_max(value::int_u8))) / 2.0; + + QImage ima = to_qimage(data::convert(value::rgb8(), result)); + + viewer->update_image(ima); + } + + + void display_seg::on_loadBtn_clicked(bool) + { + load_dicom(filepath->text()); + load_seg(segfilepath->text()); + setup_result(); + + viewer->set_image_layer_count(geom::nslis(dcm_ima)); + } + + + + // Private members + + void display_seg::setup_result() + { + initialize(result, seg_ima); + mln_piter_(result_t) p(result.domain()); + for_all(p) + { + result(p).hue() = ((seg_ima(p) * 10) % 359) + 1; + result(p).sat() = 1; + } + } + + void display_seg::load_seg(const QString& filename) + { + io::dump::load(seg_ima, filename.toStdString()); + } + + + void display_seg::load_dicom(const QString& filename) + { + image3d<value::int_u12> tmp; + io::dicom::load(tmp, filename.toStdString()); + dcm_ima = to_int_u8(tmp); + } + + + template <typename I> + mln_ch_value(I, value::int_u8) display_seg::to_int_u8(const Image<I>& ima_) + { + const I& ima = exact(ima_); + mln_precondition(ima.is_valid()); + + mln_ch_value(I, value::int_u8) + tmp = data::stretch(value::int_u8(), ima); + + return tmp; + } + + } // end of namespace scribo::demo + +} // end of namespace scribo diff --git a/milena/sandbox/lazzara/igr/gui/src/display_seg.hh b/milena/sandbox/lazzara/igr/gui/src/display_seg.hh new file mode 100644 index 0000000..c559b0d --- /dev/null +++ b/milena/sandbox/lazzara/igr/gui/src/display_seg.hh @@ -0,0 +1,96 @@ +// Copyright (C) 2009 EPITA Research and Development Laboratory (LRDE) +// +// This file is part of Olena. +// +// Olena is free software: you can redistribute it and/or modify it under +// the terms of the GNU General Public License as published by the Free +// Software Foundation, version 2 of the License. +// +// Olena is distributed in the hope that it will be useful, +// but WITHOUT ANY WARRANTY; without even the implied warranty of +// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU +// General Public License for more details. +// +// You should have received a copy of the GNU General Public License +// along with Olena. If not, see <http://www.gnu.org/licenses/>. +// +// As a special exception, you may use this file as part of a free +// software project without restriction. Specifically, if other files +// instantiate templates or use macros or inline functions from this +// file, or you compile this file and link it with other files to produce +// an executable, this file does not by itself cause the resulting +// executable to be covered by the GNU General Public License. This +// exception does not however invalidate any other reasons why the +// executable file might be covered by the GNU General Public License. + +#ifndef MLN_DEMO_SRC_DISPLAY_SEG_HH + +# include <QDir> +# include <QTimer> +# include <QStringList> +# include <QProcess> +# include <QtGui> +# include <QProgressDialog> +# include <ui_display_seg.h> + +# ifndef INCLUDE_MLN_FILES +# define MLN_INCLUDE_ONLY +# endif + +# include <mln/core/image/image3d.hh> +# include <mln/core/image/image2d.hh> +# include <mln/value/int_u8.hh> +# include <mln/value/int_u16.hh> +# include <mln/value/rgb8.hh> +# include <mln/value/hsl.hh> + +namespace mln +{ + + namespace demo + { + + class display_seg : public QWidget, private Ui::DisplaySeg + { + Q_OBJECT + + typedef image3d<value::int_u8> dcm_ima_t; + typedef image2d<value::int_u16> seg_ima_t; + typedef image2d<value::hsl_f> result_t; + + public: + display_seg(QWidget *parent = 0); + ~display_seg(); + + + private slots: + void on_browseBtn_clicked(bool); + void on_browseSegBtn_clicked(bool); + void compute_image(int sli); + void on_loadBtn_clicked(bool); + + private: // Members + + void setup_result(); + void load_seg(const QString& filename); + void load_dicom(const QString& filename); + + template <typename I> + mln_ch_value(I, value::int_u8) to_int_u8(const Image<I>& ima_); + + void prepare_and_send_result(const QString& output); + + private: // Attributes + dcm_ima_t dcm_ima; + seg_ima_t seg_ima; + value::int_u8 nlabels_; + result_t result; + + }; + + + } // end of namespace mln::demo + +} // end of namespace mln + +#endif // ! MLN_DEMO_SRC_DISPLAY_SEG_HH diff --git a/milena/sandbox/lazzara/igr/gui/src/edit_seg.cc b/milena/sandbox/lazzara/igr/gui/src/edit_seg.cc new file mode 100644 index 0000000..14e58b5 --- /dev/null +++ b/milena/sandbox/lazzara/igr/gui/src/edit_seg.cc @@ -0,0 +1,204 @@ +// Copyright (C) 2009 EPITA Research and Development Laboratory (LRDE) +// +// This file is part of Olena. +// +// Olena is free software: you can redistribute it and/or modify it under +// the terms of the GNU General Public License as published by the Free +// Software Foundation, version 2 of the License. +// +// Olena is distributed in the hope that it will be useful, +// but WITHOUT ANY WARRANTY; without even the implied warranty of +// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU +// General Public License for more details. +// +// You should have received a copy of the GNU General Public License +// along with Olena. If not, see <http://www.gnu.org/licenses/>. +// +// As a special exception, you may use this file as part of a free +// software project without restriction. Specifically, if other files +// instantiate templates or use macros or inline functions from this +// file, or you compile this file and link it with other files to produce +// an executable, this file does not by itself cause the resulting +// executable to be covered by the GNU General Public License. This +// exception does not however invalidate any other reasons why the +// executable file might be covered by the GNU General Public License. + + +#include <QtGui> + +# define INCLUDE_MLN_FILES +#include <src/edit_seg.hh> +#include <src/to_qimage.hh> + +#include <mln/core/image/image3d.hh> +#include <mln/core/image/imorph/labeled_image.hh> +#include <mln/core/concept/function.hh> + +#include <mln/data/wrap.hh> +#include <mln/data/transform_inplace.hh> + +#include <mln/value/int_u16.hh> +#include <mln/value/int_u8.hh> + +#include <mln/io/ppm/save.hh> +#include <mln/io/dump/load.hh> + +#include <mln/literal/colors.hh> + +#include <mln/labeling/colorize.hh> + +#include <mln/fun/v2v/wrap.hh> + +namespace mln +{ + +// namespace internal +// { + +// struct merge_component : Function_v2v<merge_component> +// { +// typedef value::int_u16 result; + +// merge_component(const value::int_u16& replaced, +// const value::int_u16& by) +// : replaced_(replaced), by_(by) +// { +// } + +// value::int_u16 operator()(const value::int_u16& v) const +// { +// if (v == replaced_) +// return by_; +// return v; +// } + +// value::int_u16 replaced_; +// value::int_u16 by_; +// }; + +// } // end of namespace mln::internal + + + + + namespace demo + { + + + edit_seg::edit_seg(QWidget *parent) + : QWidget(parent) + { + setupUi(this); + + connect(viewer, SIGNAL(slider_valueChanged(int)), + this, SLOT(compute_image())); + + connect(viewer, SIGNAL(mouse_draw_line(const QPointF&, const QPointF&)), + this, SLOT(join_components(const QPointF&, const QPointF&))); + + connect(viewer, SIGNAL(mouse_click(const QPointF&)), + this, SLOT(select_component(const QPointF&))); + } + + edit_seg::~edit_seg() + { + + } + + + void edit_seg::on_browseBtn_clicked(bool) + { + QString + filename = QFileDialog::getOpenFileName(this, + tr("Open Image."), + QString(), + tr("Images (*.dump)")); + + if (!filename.isEmpty()) + filepath->setText(filename); + + // Initial load. + image2d<value::int_u16> tmp; + io::dump::load(tmp, filepath->text().toStdString()); + seg_ = labeled_image<image2d<value::int_u16> >(tmp); + + selected_.resize(seg_.nlabels(), false); + + image2d<value::int_u8> tmp2 = data::wrap(value::int_u8(), seg_); + seg_rgb8_ = data::convert(value::rgb8(), tmp2); + + viewer->set_image_layer_count(1); + } + + + void edit_seg::compute_image() + { + QImage ima = to_qimage(seg_rgb8_); + viewer->update_image(ima); + } + + + void edit_seg::join_components(const QPointF& p1, const QPointF& p2) + { +// point2d +// mln_p1 = point2d(p1.y(), p1.x()), +// mln_p2 = point2d(p2.y(), p2.x()); +// if (seg_.domain().has(mln_p1) && seg_.domain().has(mln_p2) && // in domain +// seg_(mln_p1) != seg_(mln_p2) // different components +// && seg_(mln_p1) != 0 && seg_(mln_p2) != 0) // Not the wsl +// { +// std::cout << "Merging " << seg_(mln_p1) +// << " and " << seg_(mln_p2) << std::endl; +// std::cout << "mln_p1 = " << mln_p1 << " - mln_p2 = " << mln_p2 << std::endl; + +// internal::merge_component f(seg_(mln_p1), seg_(mln_p2)); +// data::transform_inplace(seg_, f); +// compute_image(); +// } + } + + void edit_seg::on_saveBtn_clicked(bool) + { + QString + filename = QFileDialog::getOpenFileName(this, + tr("Save Image."), + QString(), + tr("Images (*.dump)")); + + + image2d<value::int_u16> + out = data::transform(seg_.unmorph_(), selected_); + + io::dump::save(out, filename.toStdString()); + } + + + void edit_seg::select_component(const QPointF& p) + { + point2d + mln_p = point2d(p.y(), p.x()); + + if (seg_.domain().has(mln_p) + && !selected_(seg_(mln_p)) + && seg_(mln_p) != 0) // Not the wsl + { + selected_(seg_(mln_p)) = true; + data::fill((seg_rgb8_ | seg_.subdomain(seg_(mln_p))).rw(), + literal::red); + } + else + { + selected_(seg_(mln_p)) = false; + value::rgb8 + v = convert::to<value::rgb8>(fun::v2v:wrap<value::int_u8>(seg_(mln_p))); + + value::rgb8 v(seg_(mln_p), seg_(mln_p), seg_(mln_p)); + data::fill((seg_rgb8_ | seg_.subdomain(seg_(mln_p))).rw(), v); + } + compute_image(); + } + + + } // end of namespace mln::demo + +} // end of namespace mln diff --git a/milena/sandbox/lazzara/igr/gui/src/edit_seg.hh b/milena/sandbox/lazzara/igr/gui/src/edit_seg.hh new file mode 100644 index 0000000..0d22db5 --- /dev/null +++ b/milena/sandbox/lazzara/igr/gui/src/edit_seg.hh @@ -0,0 +1,82 @@ +// Copyright (C) 2009 EPITA Research and Development Laboratory (LRDE) +// +// This file is part of Olena. +// +// Olena is free software: you can redistribute it and/or modify it under +// the terms of the GNU General Public License as published by the Free +// Software Foundation, version 2 of the License. +// +// Olena is distributed in the hope that it will be useful, +// but WITHOUT ANY WARRANTY; without even the implied warranty of +// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU +// General Public License for more details. +// +// You should have received a copy of the GNU General Public License +// along with Olena. If not, see <http://www.gnu.org/licenses/>. +// +// As a special exception, you may use this file as part of a free +// software project without restriction. Specifically, if other files +// instantiate templates or use macros or inline functions from this +// file, or you compile this file and link it with other files to produce +// an executable, this file does not by itself cause the resulting +// executable to be covered by the GNU General Public License. This +// exception does not however invalidate any other reasons why the +// executable file might be covered by the GNU General Public License. + +#ifndef MLN_DEMO_SRC_EDIT_SEG_HH + +# include <QDir> +# include <QTimer> +# include <QStringList> +# include <QProcess> +# include <QtGui> +# include <QProgressDialog> +# include <ui_edit_seg.h> + +# ifndef INCLUDE_MLN_FILES +# define MLN_INCLUDE_ONLY +# endif + +# include <mln/core/image/image2d.hh> +# include <mln/core/image/imorph/labeled_image.hh> +# include <mln/value/int_u16.hh> +# include <mln/value/rgb8.hh> +# include <mln/util/array.hh> + +namespace mln +{ + + namespace demo + { + + class edit_seg : public QWidget, private Ui::EditSeg + { + Q_OBJECT + + public: + edit_seg(QWidget *parent = 0); + ~edit_seg(); + + + private slots: + void on_browseBtn_clicked(bool); + void on_saveBtn_clicked(bool); + void compute_image(); + void join_components(const QPointF& p1, const QPointF& p2); + void select_component(const QPointF& p); + + private: // Members + + + private: // Attributes + labeled_image<image2d<value::int_u16> > seg_; + image2d<value::rgb8> seg_rgb8_; + mln::util::array<bool> selected_; + }; + + + } // end of namespace mln::demo + +} // end of namespace mln + +#endif // ! MLN_DEMO_SRC_EDIT_SEG_HH diff --git a/milena/sandbox/lazzara/igr/gui/src/image_viewer.cc b/milena/sandbox/lazzara/igr/gui/src/image_viewer.cc new file mode 100644 index 0000000..4354aed --- /dev/null +++ b/milena/sandbox/lazzara/igr/gui/src/image_viewer.cc @@ -0,0 +1,194 @@ +// Copyright (C) 2009 EPITA Research and Development Laboratory (LRDE) +// +// This file is part of Olena. +// +// Olena is free software: you can redistribute it and/or modify it under +// the terms of the GNU General Public License as published by the Free +// Software Foundation, version 2 of the License. +// +// Olena is distributed in the hope that it will be useful, +// but WITHOUT ANY WARRANTY; without even the implied warranty of +// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU +// General Public License for more details. +// +// You should have received a copy of the GNU General Public License +// along with Olena. If not, see <http://www.gnu.org/licenses/>. +// +// As a special exception, you may use this file as part of a free +// software project without restriction. Specifically, if other files +// instantiate templates or use macros or inline functions from this +// file, or you compile this file and link it with other files to produce +// an executable, this file does not by itself cause the resulting +// executable to be covered by the GNU General Public License. This +// exception does not however invalidate any other reasons why the +// executable file might be covered by the GNU General Public License. + +# include <src/image_viewer.hh> +# include <src/internal/interactive_scene.hh> + +namespace mln +{ + + namespace demo + { + + image_viewer::image_viewer(QWidget *parent) + : QWidget(parent), item_(0) + { + setupUi(this); + + connect(image->verticalScrollBar(), SIGNAL(valueChanged(int)), + this, SLOT(move_vertical_sliders(int))); + connect(image->horizontalScrollBar(), SIGNAL(valueChanged(int)), + this, SLOT(move_horizontal_sliders(int))); + + setup_scene(); + + slider->setMinimum(0); + visible_slider(false); + } + + + + image_viewer::~image_viewer() + { + + } + + + // Private members + + void image_viewer::setup_scene() + { + QGraphicsScene *scene = new internal::interactiveScene(); + image->setScene(scene); + + connect(scene, SIGNAL(mouse_draw_line(const QPointF&,const QPointF&)), + this, SIGNAL(mouse_draw_line(const QPointF&,const QPointF&))); + connect(scene, SIGNAL(mouse_click(const QPointF&)), + this, SIGNAL(mouse_click(const QPointF&))); + + image->show(); + } + + void image_viewer::draw_image(const QImage& ima) + { + QPixmap pixmap = QPixmap::fromImage(ima); + + if (item_ != 0) + { + image->scene()->removeItem(item_); + delete item_; + } + + item_ = image->scene()->addPixmap(pixmap); + image->scene()->setSceneRect(item_->boundingRect()); + if (pixmap.width() > image->maximumViewportSize().width()) + image->fitInView(item_->boundingRect(), Qt::KeepAspectRatio); + + zoomLabel->setEnabled(true); + zoomIn->setEnabled(true); + zoomOut->setEnabled(true); + zoomFixed->setEnabled(true); + zoomOriginal->setEnabled(true); + } + + void image_viewer::resize_image(const QRectF& rect) + { + if (item_ != 0) + image->fitInView(rect, Qt::KeepAspectRatio); + } + + void image_viewer::resizeEvent(QResizeEvent * event) + { + if (item_ != 0) + resize_image(item_->boundingRect()); + event->ignore(); + } + + + void image_viewer::keyPressEvent(QKeyEvent *event) + { + if (event->text() == QString("+")) + { + on_zoomIn_clicked(); + event->accept(); + } + else if (event->text() == QString("-")) + { + on_zoomOut_clicked(); + event->accept(); + } + else + event->ignore(); + } + + + // Private slots + + void image_viewer::visible_slider(bool b) + { + slider->setVisible(b); + label_2->setVisible(b); + frame_nb->setVisible(b); + } + + void image_viewer::move_vertical_sliders(int value) + { + image->verticalScrollBar()->setValue(value); + } + + + void image_viewer::move_horizontal_sliders(int value) + { + image->horizontalScrollBar()->setValue(value); + } + + + void image_viewer::on_slider_valueChanged(int sli) + { + frame_nb->setText(QString::number(sli)); + emit slider_valueChanged(sli); + } + + void image_viewer::update_image(const QImage& ima) + { + draw_image(ima); + } + + + void image_viewer::on_zoomIn_clicked() + { + image->scale(1.2, 1.2); + } + + void image_viewer::on_zoomOut_clicked() + { + image->scale(1 / 1.2, 1 / 1.2); + } + + void image_viewer::on_zoomFixed_clicked() + { + resize_image(item_->boundingRect()); + } + + void image_viewer::on_zoomOriginal_clicked() + { + resize_image(image->viewport()->geometry()); + } + + + // Public slots + + void image_viewer::set_image_layer_count(unsigned nslis) + { + visible_slider(nslis > 1); + + slider->setMaximum(nslis - 1); + on_slider_valueChanged(0); + } + + + } // end of namespace mln::demo + +} // end of namespace mln diff --git a/milena/sandbox/lazzara/igr/gui/src/image_viewer.hh b/milena/sandbox/lazzara/igr/gui/src/image_viewer.hh new file mode 100644 index 0000000..137cbc2 --- /dev/null +++ b/milena/sandbox/lazzara/igr/gui/src/image_viewer.hh @@ -0,0 +1,102 @@ +// Copyright (C) 2009 EPITA Research and Development Laboratory (LRDE) +// +// This file is part of Olena. +// +// Olena is free software: you can redistribute it and/or modify it under +// the terms of the GNU General Public License as published by the Free +// Software Foundation, version 2 of the License. +// +// Olena is distributed in the hope that it will be useful, +// but WITHOUT ANY WARRANTY; without even the implied warranty of +// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU +// General Public License for more details. +// +// You should have received a copy of the GNU General Public License +// along with Olena. If not, see <http://www.gnu.org/licenses/>. +// +// As a special exception, you may use this file as part of a free +// software project without restriction. Specifically, if other files +// instantiate templates or use macros or inline functions from this +// file, or you compile this file and link it with other files to produce +// an executable, this file does not by itself cause the resulting +// executable to be covered by the GNU General Public License. This +// exception does not however invalidate any other reasons why the +// executable file might be covered by the GNU General Public License. + +#ifndef MLN_DEMO_SRC_IMAGE_VIEWER_HH +# define MLN_DEMO_SRC_IMAGE_VIEWER_HH + +# include <QApplication> +# include <QtCore> +# include <QtGui> + +# include <ui_image_viewer.h> + +namespace mln +{ + + namespace demo + { + + + class image_viewer + : public QWidget, private Ui::ImageViewer + { + Q_OBJECT; + + public: + image_viewer(QWidget *parent = 0); + ~image_viewer(); + + + private: // members + void setup_scene(); + + void draw_image(const QImage& ima); + + void resize_image(const QRectF& rect); + + void keyPressEvent(QKeyEvent *event); + void resizeEvent(QResizeEvent * event); +// void mouseMoveEvent(QMouseEvent *e); +// void mousePressEvent(QMouseEvent *e); +// void mouseReleasedEvent(QMouseEvent *e); + + private slots: + void visible_slider(bool b); + + void move_vertical_sliders(int value); + void move_horizontal_sliders(int value); + + void on_slider_valueChanged(int sli); + + void on_zoomIn_clicked(); + void on_zoomOut_clicked(); + void on_zoomFixed_clicked(); + void on_zoomOriginal_clicked(); + + + public slots: + void set_image_layer_count(unsigned nslis); + void update_image(const QImage& ima); + + + signals: + void slider_valueChanged(int sli); + void mouse_draw_line(const QPointF& p1, const QPointF& p2); + void mouse_click(const QPointF& p); + + + private: // attributes + QGraphicsItem *item_; + bool mouse_moving_; + QPoint p_start_; + }; + + + } // end of namespace mln::demo + +} // end of namespace mln + + +#endif // ! MLN_DEMO_SRC_IMAGE_VIEWER_HH diff --git a/milena/sandbox/lazzara/igr/gui/src/internal/interactive_scene.cc b/milena/sandbox/lazzara/igr/gui/src/internal/interactive_scene.cc new file mode 100644 index 0000000..b763cc3 --- /dev/null +++ b/milena/sandbox/lazzara/igr/gui/src/internal/interactive_scene.cc @@ -0,0 +1,88 @@ +// Copyright (C) 2009 EPITA Research and Development Laboratory (LRDE) +// +// This file is part of Olena. +// +// Olena is free software: you can redistribute it and/or modify it under +// the terms of the GNU General Public License as published by the Free +// Software Foundation, version 2 of the License. +// +// Olena is distributed in the hope that it will be useful, +// but WITHOUT ANY WARRANTY; without even the implied warranty of +// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU +// General Public License for more details. +// +// You should have received a copy of the GNU General Public License +// along with Olena. If not, see <http://www.gnu.org/licenses/>. +// +// As a special exception, you may use this file as part of a free +// software project without restriction. Specifically, if other files +// instantiate templates or use macros or inline functions from this +// file, or you compile this file and link it with other files to produce +// an executable, this file does not by itself cause the resulting +// executable to be covered by the GNU General Public License. This +// exception does not however invalidate any other reasons why the +// executable file might be covered by the GNU General Public License. + +# include <src/internal/interactive_scene.hh> + +namespace mln +{ + + namespace demo + { + + namespace internal + { + + interactiveScene::interactiveScene(QObject * parent) + : QGraphicsScene(parent) + { + line_.setZValue(1); + + QPen pen; + pen.setColor(QColor(Qt::red)); + pen.setStyle(Qt::SolidLine); + pen.setWidth(1); + + line_.setPen(pen); + } + + + void interactiveScene::mouseMoveEvent(QGraphicsSceneMouseEvent *e) + { + line_.setLine(QLineF(p_start_, e->scenePos())); + mouse_moved_ = true; + + e->accept(); + } + + void interactiveScene::mousePressEvent(QGraphicsSceneMouseEvent *e) + { + p_start_ = e->scenePos(); + mouse_moved_ = false; + + line_.setLine(QLineF(e->scenePos(), e->scenePos())); + addItem(&line_); + + e->accept(); + } + + void interactiveScene::mouseReleaseEvent(QGraphicsSceneMouseEvent *e) + { + if (line_.scene() == this) + removeItem(&line_); + + if (mouse_moved_) + emit mouse_draw_line(p_start_, e->scenePos()); + else + emit mouse_click(e->scenePos()); + + e->ignore(); + } + + + } // end of namespace mln::demo::internal + + } // end of namespace mln::demo + +} // end of namespace mln diff --git a/milena/sandbox/lazzara/igr/gui/src/internal/interactive_scene.hh b/milena/sandbox/lazzara/igr/gui/src/internal/interactive_scene.hh new file mode 100644 index 0000000..81f4068 --- /dev/null +++ b/milena/sandbox/lazzara/igr/gui/src/internal/interactive_scene.hh @@ -0,0 +1,73 @@ +// Copyright (C) 2009 EPITA Research and Development Laboratory (LRDE) +// +// This file is part of Olena. +// +// Olena is free software: you can redistribute it and/or modify it under +// the terms of the GNU General Public License as published by the Free +// Software Foundation, version 2 of the License. +// +// Olena is distributed in the hope that it will be useful, +// but WITHOUT ANY WARRANTY; without even the implied warranty of +// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU +// General Public License for more details. +// +// You should have received a copy of the GNU General Public License +// along with Olena. If not, see <http://www.gnu.org/licenses/>. +// +// As a special exception, you may use this file as part of a free +// software project without restriction. Specifically, if other files +// instantiate templates or use macros or inline functions from this +// file, or you compile this file and link it with other files to produce +// an executable, this file does not by itself cause the resulting +// executable to be covered by the GNU General Public License. This +// exception does not however invalidate any other reasons why the +// executable file might be covered by the GNU General Public License. + +#ifndef MLN_DEMO_SRC_INTERNAL_INTERACTIVE_SCENE_HH +# define MLN_DEMO_SRC_INTERNAL_INTERACTIVE_SCENE_HH + +# include <QtGui/QGraphicsScene> +# include <QtGui/QGraphicsSceneMouseEvent> +# include <QtGui/QGraphicsLineItem> +# include <QtCore/QPoint> +# include <QtCore/QDebug> + +namespace mln +{ + + namespace demo + { + + namespace internal + { + + class interactiveScene : public QGraphicsScene + { + Q_OBJECT + + public: + + interactiveScene(QObject * parent = 0); + + void mouseMoveEvent(QGraphicsSceneMouseEvent *e); + void mousePressEvent(QGraphicsSceneMouseEvent *e); + void mouseReleaseEvent(QGraphicsSceneMouseEvent *e); + + signals: + void mouse_draw_line(const QPointF& p1, const QPointF& p2); + void mouse_click(const QPointF& p); + + private: + QGraphicsLineItem line_; + bool mouse_moved_; + QPointF p_start_; + }; + + + } // end of namespace mln::demo::internal + + } // end of namespace mln::demo + +} // end of namespace mln + +#endif // ! MLN_DEMO_SRC_INTERNAL_INTERACTIVE_SCENE_HH diff --git a/milena/sandbox/lazzara/igr/gui/src/main.cc b/milena/sandbox/lazzara/igr/gui/src/main.cc new file mode 100644 index 0000000..cbb4ec1 --- /dev/null +++ b/milena/sandbox/lazzara/igr/gui/src/main.cc @@ -0,0 +1,39 @@ +// Copyright (C) 2009 EPITA Research and Development Laboratory (LRDE) +// +// This file is part of Olena. +// +// Olena is free software: you can redistribute it and/or modify it under +// the terms of the GNU General Public License as published by the Free +// Software Foundation, version 2 of the License. +// +// Olena is distributed in the hope that it will be useful, +// but WITHOUT ANY WARRANTY; without even the implied warranty of +// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU +// General Public License for more details. +// +// You should have received a copy of the GNU General Public License +// along with Olena. If not, see <http://www.gnu.org/licenses/>. +// +// As a special exception, you may use this file as part of a free +// software project without restriction. Specifically, if other files +// instantiate templates or use macros or inline functions from this +// file, or you compile this file and link it with other files to produce +// an executable, this file does not by itself cause the resulting +// executable to be covered by the GNU General Public License. This +// exception does not however invalidate any other reasons why the +// executable file might be covered by the GNU General Public License. + +#include <QApplication> +#include <QtGui> + +#include <src/main_window.hh> + +int main(int argc, char *argv[]) +{ + QApplication app(argc, argv); + + mln::demo::main_window win; + + win.show(); + return app.exec(); +} diff --git a/milena/sandbox/lazzara/igr/gui/src/main_window.cc b/milena/sandbox/lazzara/igr/gui/src/main_window.cc new file mode 100644 index 0000000..bdae998 --- /dev/null +++ b/milena/sandbox/lazzara/igr/gui/src/main_window.cc @@ -0,0 +1,56 @@ +// Copyright (C) 2009 EPITA Research and Development Laboratory (LRDE) +// +// This file is part of Olena. +// +// Olena is free software: you can redistribute it and/or modify it under +// the terms of the GNU General Public License as published by the Free +// Software Foundation, version 2 of the License. +// +// Olena is distributed in the hope that it will be useful, +// but WITHOUT ANY WARRANTY; without even the implied warranty of +// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU +// General Public License for more details. +// +// You should have received a copy of the GNU General Public License +// along with Olena. If not, see <http://www.gnu.org/licenses/>. +// +// As a special exception, you may use this file as part of a free +// software project without restriction. Specifically, if other files +// instantiate templates or use macros or inline functions from this +// file, or you compile this file and link it with other files to produce +// an executable, this file does not by itself cause the resulting +// executable to be covered by the GNU General Public License. This +// exception does not however invalidate any other reasons why the +// executable file might be covered by the GNU General Public License. + + +#include <QtCore> +#include <QtGui> +#include <src/main_window.hh> + +namespace mln +{ + + namespace demo + { + + main_window::main_window(QWidget *parent) + : QMainWindow(parent) + { + setupUi(this); + + // No status bar. + setStatusBar(0); + + } + + main_window::~main_window() + { + } + + + } // end of namespace scribo::demo + +} // end of namespace scribo + + diff --git a/milena/sandbox/lazzara/igr/gui/src/main_window.hh b/milena/sandbox/lazzara/igr/gui/src/main_window.hh new file mode 100644 index 0000000..502a514 --- /dev/null +++ b/milena/sandbox/lazzara/igr/gui/src/main_window.hh @@ -0,0 +1,60 @@ +// Copyright (C) 2009 EPITA Research and Development Laboratory (LRDE) +// +// This file is part of Olena. +// +// Olena is free software: you can redistribute it and/or modify it under +// the terms of the GNU General Public License as published by the Free +// Software Foundation, version 2 of the License. +// +// Olena is distributed in the hope that it will be useful, +// but WITHOUT ANY WARRANTY; without even the implied warranty of +// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU +// General Public License for more details. +// +// You should have received a copy of the GNU General Public License +// along with Olena. If not, see <http://www.gnu.org/licenses/>. +// +// As a special exception, you may use this file as part of a free +// software project without restriction. Specifically, if other files +// instantiate templates or use macros or inline functions from this +// file, or you compile this file and link it with other files to produce +// an executable, this file does not by itself cause the resulting +// executable to be covered by the GNU General Public License. This +// exception does not however invalidate any other reasons why the +// executable file might be covered by the GNU General Public License. + +#ifndef MLN_DEMO_SRC_MAIN_WINDOW_HH + +# include <QtGui> +# include <ui_main_window.h> + +namespace mln +{ + + namespace demo + { + + + class main_window : public QMainWindow, private Ui::MainWindow + { + Q_OBJECT + + public: + main_window(QWidget *parent = 0); + ~main_window(); + + + private slots: + + private: // Members + + private: // Attributes + + }; + + + } // end of namespace mln::demo + +} // end of namespace mln + +#endif // ! MLN_DEMO_SRC_MAIN_WINDOW_HH diff --git a/milena/sandbox/lazzara/igr/gui/src/to_qimage.hh b/milena/sandbox/lazzara/igr/gui/src/to_qimage.hh new file mode 100644 index 0000000..75c9756 --- /dev/null +++ b/milena/sandbox/lazzara/igr/gui/src/to_qimage.hh @@ -0,0 +1,63 @@ +// Copyright (C) 2009 EPITA Research and Development Laboratory (LRDE) +// +// This file is part of Olena. +// +// Olena is free software: you can redistribute it and/or modify it under +// the terms of the GNU General Public License as published by the Free +// Software Foundation, version 2 of the License. +// +// Olena is distributed in the hope that it will be useful, +// but WITHOUT ANY WARRANTY; without even the implied warranty of +// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU +// General Public License for more details. +// +// You should have received a copy of the GNU General Public License +// along with Olena. If not, see <http://www.gnu.org/licenses/>. +// +// As a special exception, you may use this file as part of a free +// software project without restriction. Specifically, if other files +// instantiate templates or use macros or inline functions from this +// file, or you compile this file and link it with other files to produce +// an executable, this file does not by itself cause the resulting +// executable to be covered by the GNU General Public License. This +// exception does not however invalidate any other reasons why the +// executable file might be covered by the GNU General Public License. + + +#ifndef MLN_DEMO_SRC_TO_QIMAGE_HH +# define MLN_DEMO_SRC_TO_QIMAGE_HH + +# include <QtGui/QImage> + +# include <mln/core/concept/image.hh> +# include <mln/geom/nrows.hh> +# include <mln/geom/ncols.hh> +# include <mln/border/resize.hh> + +namespace mln +{ + + template <typename I> + inline + QImage to_qimage(const Image<I>& ima_) + { + const I& ima = exact(ima_); + mln_precondition(ima.is_valid()); + + const int + nrows = geom::nrows(ima), + ncols = geom::ncols(ima); + + // Required by a one-shot data copy: + mln::border::resize(ima, 0); + + QImage qima(ncols, nrows, QImage::Format_RGB888); + std::memcpy(qima.scanLine(0), + ima.buffer(), + ima.nelements() * 3); + return qima; + } + +} // end of namespace mln + +#endif // ! MLN_DEMO_SRC_TO_QIMAGE_HH diff --git a/milena/sandbox/lazzara/igr/gui/src/widgets.cc b/milena/sandbox/lazzara/igr/gui/src/widgets.cc new file mode 100644 index 0000000..5968dc4 --- /dev/null +++ b/milena/sandbox/lazzara/igr/gui/src/widgets.cc @@ -0,0 +1,3 @@ +// FIXME: UGLY!!! Avoir multiple definition of Milena's code. +# include "src/display_seg.cc" +# include "src/edit_seg.cc" diff --git a/milena/sandbox/lazzara/igr/gui/ui/bak/mainwindow.ui b/milena/sandbox/lazzara/igr/gui/ui/bak/mainwindow.ui new file mode 100644 index 0000000..59c88b7 --- /dev/null +++ b/milena/sandbox/lazzara/igr/gui/ui/bak/mainwindow.ui @@ -0,0 +1,277 @@ +<ui version="4.0" > + <class>MainWindow</class> + <widget class="QMainWindow" name="MainWindow" > + <property name="geometry" > + <rect> + <x>0</x> + <y>0</y> + <width>729</width> + <height>455</height> + </rect> + </property> + <property name="windowTitle" > + <string/> + </property> + <property name="dockOptions" > + <set>QMainWindow::AllowNestedDocks|QMainWindow::AllowTabbedDocks|QMainWindow::AnimatedDocks</set> + </property> + <property name="unifiedTitleAndToolBarOnMac" > + <bool>false</bool> + </property> + <widget class="QWidget" name="centralwidget" > + <layout class="QGridLayout" name="gridLayout_3" > + <item row="0" column="0" > + <layout class="QVBoxLayout" name="verticalLayout" > + <item> + <layout class="QGridLayout" name="gridLayout" > + <item row="0" column="0" > + <widget class="QLineEdit" name="filepath" /> + </item> + <item row="0" column="1" > + <widget class="QPushButton" name="browseBtn" > + <property name="text" > + <string>&Browse</string> + </property> + <property name="icon" > + <iconset resource="../demo.qrc" > + <normaloff>:/icons/document-open.png</normaloff>:/icons/document-open.png</iconset> + </property> + <property name="shortcut" > + <string>Ctrl+B</string> + </property> + </widget> + </item> + </layout> + </item> + <item> + <layout class="QHBoxLayout" name="horizontalLayout" > + <property name="bottomMargin" > + <number>0</number> + </property> + <item> + <spacer name="horizontalSpacer_2" > + <property name="orientation" > + <enum>Qt::Horizontal</enum> + </property> + <property name="sizeHint" stdset="0" > + <size> + <width>40</width> + <height>20</height> + </size> + </property> + </spacer> + </item> + <item> + <widget class="QPushButton" name="displayBtn" > + <property name="enabled" > + <bool>false</bool> + </property> + <property name="text" > + <string>Refresh</string> + </property> + <property name="icon" > + <iconset resource="../demo.qrc" > + <normaloff>:/icons/view-refresh.png</normaloff>:/icons/view-refresh.png</iconset> + </property> + </widget> + </item> + <item> + <widget class="Line" name="line_2" > + <property name="orientation" > + <enum>Qt::Vertical</enum> + </property> + </widget> + </item> + <item> + <widget class="QCheckBox" name="useCache" > + <property name="text" > + <string>Enable cache</string> + </property> + <property name="checked" > + <bool>true</bool> + </property> + </widget> + </item> + <item> + <widget class="Line" name="line" > + <property name="orientation" > + <enum>Qt::Vertical</enum> + </property> + </widget> + </item> + <item> + <widget class="QPushButton" name="autoDemo" > + <property name="text" > + <string>Auto demo</string> + </property> + <property name="shortcut" > + <string>Ctrl+D</string> + </property> + <property name="checkable" > + <bool>true</bool> + </property> + </widget> + </item> + <item> + <widget class="QLineEdit" name="timeoutDelay" > + <property name="maximumSize" > + <size> + <width>30</width> + <height>16777215</height> + </size> + </property> + <property name="inputMask" > + <string/> + </property> + <property name="text" > + <string>5</string> + </property> + </widget> + </item> + <item> + <widget class="QLabel" name="label" > + <property name="text" > + <string>s.</string> + </property> + </widget> + </item> + <item> + <widget class="Line" name="line_3" > + <property name="orientation" > + <enum>Qt::Vertical</enum> + </property> + </widget> + </item> + <item> + <widget class="QPushButton" name="runBtn" > + <property name="enabled" > + <bool>false</bool> + </property> + <property name="text" > + <string>Run</string> + </property> + <property name="icon" > + <iconset resource="../demo.qrc" > + <normaloff>:/icons/go-next.png</normaloff>:/icons/go-next.png</iconset> + </property> + </widget> + </item> + <item> + <widget class="QCheckBox" name="autoRun" > + <property name="text" > + <string>Auto Run</string> + </property> + <property name="checked" > + <bool>true</bool> + </property> + </widget> + </item> + </layout> + </item> + </layout> + </item> + <item row="1" column="0" > + <widget class="QSplitter" name="splitter" > + <property name="sizePolicy" > + <sizepolicy vsizetype="Expanding" hsizetype="Expanding" > + <horstretch>0</horstretch> + <verstretch>0</verstretch> + </sizepolicy> + </property> + <property name="orientation" > + <enum>Qt::Horizontal</enum> + </property> + <widget class="QWidget" name="" > + <layout class="QVBoxLayout" name="verticalLayout_2" > + <property name="sizeConstraint" > + <enum>QLayout::SetMaximumSize</enum> + </property> + <item> + <widget class="QListWidget" name="listWidget" > + <property name="sizePolicy" > + <sizepolicy vsizetype="Expanding" hsizetype="Maximum" > + <horstretch>0</horstretch> + <verstretch>0</verstretch> + </sizepolicy> + </property> + </widget> + </item> + <item> + <widget class="QFrame" name="frame" > + <property name="sizePolicy" > + <sizepolicy vsizetype="Expanding" hsizetype="Maximum" > + <horstretch>0</horstretch> + <verstretch>0</verstretch> + </sizepolicy> + </property> + <property name="frameShape" > + <enum>QFrame::StyledPanel</enum> + </property> + <property name="frameShadow" > + <enum>QFrame::Raised</enum> + </property> + </widget> + </item> + <item> + <widget class="QFrame" name="imginfo" > + <property name="sizePolicy" > + <sizepolicy vsizetype="Expanding" hsizetype="Maximum" > + <horstretch>0</horstretch> + <verstretch>0</verstretch> + </sizepolicy> + </property> + <property name="frameShape" > + <enum>QFrame::StyledPanel</enum> + </property> + <property name="frameShadow" > + <enum>QFrame::Raised</enum> + </property> + </widget> + </item> + </layout> + </widget> + <widget class="QWidget" name="" > + <layout class="QGridLayout" name="gridLayout_2" > + <property name="sizeConstraint" > + <enum>QLayout::SetNoConstraint</enum> + </property> + </layout> + </widget> + </widget> + </item> + </layout> + </widget> + <widget class="QMenuBar" name="menubar" > + <property name="geometry" > + <rect> + <x>0</x> + <y>0</y> + <width>729</width> + <height>31</height> + </rect> + </property> + </widget> + <widget class="QStatusBar" name="statusbar" /> + </widget> + <resources> + <include location="../demo.qrc" /> + </resources> + <connections> + <connection> + <sender>filepath</sender> + <signal>returnPressed()</signal> + <receiver>displayBtn</receiver> + <slot>click()</slot> + <hints> + <hint type="sourcelabel" > + <x>213</x> + <y>62</y> + </hint> + <hint type="destinationlabel" > + <x>564</x> + <y>64</y> + </hint> + </hints> + </connection> + </connections> +</ui> diff --git a/milena/sandbox/lazzara/igr/gui/ui/display_seg.ui b/milena/sandbox/lazzara/igr/gui/ui/display_seg.ui new file mode 100644 index 0000000..f005511 --- /dev/null +++ b/milena/sandbox/lazzara/igr/gui/ui/display_seg.ui @@ -0,0 +1,108 @@ +<ui version="4.0" > + <class>DisplaySeg</class> + <widget class="QWidget" name="DisplaySeg" > + <property name="geometry" > + <rect> + <x>0</x> + <y>0</y> + <width>400</width> + <height>300</height> + </rect> + </property> + <property name="windowTitle" > + <string>Form</string> + </property> + <layout class="QGridLayout" name="gridLayout" > + <item row="0" column="0" > + <layout class="QVBoxLayout" name="verticalLayout" > + <item> + <layout class="QHBoxLayout" name="horizontalLayout" > + <item> + <widget class="QLabel" name="label" > + <property name="text" > + <string>Image</string> + </property> + </widget> + </item> + <item> + <widget class="QLineEdit" name="filepath" /> + </item> + <item> + <widget class="QPushButton" name="browseBtn" > + <property name="text" > + <string>&Browse</string> + </property> + </widget> + </item> + </layout> + </item> + <item> + <layout class="QHBoxLayout" name="horizontalLayout_2" > + <item> + <widget class="QLabel" name="label_2" > + <property name="text" > + <string>Segmentation</string> + </property> + </widget> + </item> + <item> + <widget class="QLineEdit" name="segfilepath" /> + </item> + <item> + <widget class="QPushButton" name="browseSegBtn" > + <property name="text" > + <string>&Browse</string> + </property> + </widget> + </item> + </layout> + </item> + <item> + <layout class="QHBoxLayout" name="horizontalLayout_3" > + <item> + <spacer name="horizontalSpacer" > + <property name="orientation" > + <enum>Qt::Horizontal</enum> + </property> + <property name="sizeHint" stdset="0" > + <size> + <width>48</width> + <height>17</height> + </size> + </property> + </spacer> + </item> + <item> + <widget class="QPushButton" name="loadBtn" > + <property name="text" > + <string>&Load</string> + </property> + </widget> + </item> + </layout> + </item> + <item> + <widget class="mln::demo::image_viewer" native="1" name="viewer" > + <property name="sizePolicy" > + <sizepolicy vsizetype="Expanding" hsizetype="Expanding" > + <horstretch>0</horstretch> + <verstretch>0</verstretch> + </sizepolicy> + </property> + </widget> + </item> + </layout> + </item> + </layout> + </widget> + <customwidgets> + <customwidget> + <class>mln::demo::image_viewer</class> + <extends>QWidget</extends> + <header>src/image_viewer.hh</header> + <container>1</container> + </customwidget> + </customwidgets> + <resources/> + <connections/> +</ui> diff --git a/milena/sandbox/lazzara/igr/gui/ui/edit_seg.ui b/milena/sandbox/lazzara/igr/gui/ui/edit_seg.ui new file mode 100644 index 0000000..f79026d --- /dev/null +++ b/milena/sandbox/lazzara/igr/gui/ui/edit_seg.ui @@ -0,0 +1,97 @@ +<ui version="4.0" > + <class>EditSeg</class> + <widget class="QWidget" name="EditSeg" > + <property name="geometry" > + <rect> + <x>0</x> + <y>0</y> + <width>400</width> + <height>300</height> + </rect> + </property> + <property name="windowTitle" > + <string>Form</string> + </property> + <layout class="QGridLayout" name="gridLayout" > + <item row="0" column="0" > + <layout class="QVBoxLayout" name="verticalLayout" > + <item> + <layout class="QHBoxLayout" name="horizontalLayout_2" > + <item> + <widget class="QLabel" name="label_2" > + <property name="text" > + <string>Segmentation</string> + </property> + </widget> + </item> + <item> + <widget class="QLineEdit" name="filepath" /> + </item> + <item> + <widget class="QPushButton" name="browseBtn" > + <property name="text" > + <string>&Browse</string> + </property> + </widget> + </item> + </layout> + </item> + <item> + <layout class="QHBoxLayout" name="horizontalLayout_3" > + <item> + <spacer name="horizontalSpacer" > + <property name="orientation" > + <enum>Qt::Horizontal</enum> + </property> + <property name="sizeHint" stdset="0" > + <size> + <width>48</width> + <height>17</height> + </size> + </property> + </spacer> + </item> + <item> + <widget class="QPushButton" name="reloadBtn" > + <property name="text" > + <string>&Reload</string> + </property> + </widget> + </item> + <item> + <widget class="QPushButton" name="saveBtn" > + <property name="enabled" > + <bool>false</bool> + </property> + <property name="text" > + <string>&Save changes</string> + </property> + </widget> + </item> + </layout> + </item> + <item> + <widget class="mln::demo::image_viewer" native="1" name="viewer" > + <property name="sizePolicy" > + <sizepolicy vsizetype="Expanding" hsizetype="Expanding" > + <horstretch>0</horstretch> + <verstretch>0</verstretch> + </sizepolicy> + </property> + </widget> + </item> + </layout> + </item> + </layout> + </widget> + <customwidgets> + <customwidget> + <class>mln::demo::image_viewer</class> + <extends>QWidget</extends> + <header>src/image_viewer.hh</header> + <container>1</container> + </customwidget> + </customwidgets> + <resources/> + <connections/> +</ui> diff --git a/milena/sandbox/lazzara/igr/gui/ui/image_viewer.ui b/milena/sandbox/lazzara/igr/gui/ui/image_viewer.ui new file mode 100644 index 0000000..450f982 --- /dev/null +++ b/milena/sandbox/lazzara/igr/gui/ui/image_viewer.ui @@ -0,0 +1,154 @@ +<ui version="4.0" > + <class>ImageViewer</class> + <widget class="QWidget" name="ImageViewer" > + <property name="geometry" > + <rect> + <x>0</x> + <y>0</y> + <width>464</width> + <height>350</height> + </rect> + </property> + <property name="sizePolicy" > + <sizepolicy vsizetype="Expanding" hsizetype="Expanding" > + <horstretch>0</horstretch> + <verstretch>0</verstretch> + </sizepolicy> + </property> + <property name="windowTitle" > + <string>Form</string> + </property> + <layout class="QVBoxLayout" name="verticalLayout_2" > + <item> + <layout class="QVBoxLayout" name="verticalLayout" > + <item> + <layout class="QHBoxLayout" name="horizontalLayout_2" > + <item> + <spacer name="horizontalSpacer" > + <property name="orientation" > + <enum>Qt::Horizontal</enum> + </property> + <property name="sizeHint" stdset="0" > + <size> + <width>40</width> + <height>20</height> + </size> + </property> + </spacer> + </item> + <item> + <widget class="QLabel" name="zoomLabel" > + <property name="enabled" > + <bool>false</bool> + </property> + <property name="text" > + <string>Zoom:</string> + </property> + </widget> + </item> + <item> + <widget class="QPushButton" name="zoomIn" > + <property name="enabled" > + <bool>false</bool> + </property> + <property name="text" > + <string>+</string> + </property> + </widget> + </item> + <item> + <widget class="QPushButton" name="zoomOut" > + <property name="enabled" > + <bool>false</bool> + </property> + <property name="text" > + <string>-</string> + </property> + </widget> + </item> + <item> + <widget class="QPushButton" name="zoomFixed" > + <property name="enabled" > + <bool>false</bool> + </property> + <property name="text" > + <string>Fixed width</string> + </property> + </widget> + </item> + <item> + <widget class="QPushButton" name="zoomOriginal" > + <property name="enabled" > + <bool>false</bool> + </property> + <property name="text" > + <string>Original size</string> + </property> + </widget> + </item> + <item> + <spacer name="horizontalSpacer_2" > + <property name="orientation" > + <enum>Qt::Horizontal</enum> + </property> + <property name="sizeHint" stdset="0" > + <size> + <width>40</width> + <height>20</height> + </size> + </property> + </spacer> + </item> + </layout> + </item> + <item> + <widget class="QGraphicsView" name="image" > + <property name="interactive" > + <bool>true</bool> + </property> + <property name="renderHints" > + <set>QPainter::SmoothPixmapTransform|QPainter::TextAntialiasing</set> + </property> + </widget> + </item> + <item> + <layout class="QHBoxLayout" name="sliderLayout" > + <item> + <widget class="QSlider" name="slider" > + <property name="orientation" > + <enum>Qt::Horizontal</enum> + </property> + <property name="tickPosition" > + <enum>QSlider::TicksAbove</enum> + </property> + </widget> + </item> + <item> + <widget class="QLabel" name="label_2" > + <property name="text" > + <string>Current Frame :</string> + </property> + </widget> + </item> + <item> + <widget class="QLabel" name="frame_nb" > + <property name="font" > + <font> + <weight>75</weight> + <bold>true</bold> + </font> + </property> + <property name="text" > + <string>0</string> + </property> + </widget> + </item> + </layout> + </item> + </layout> + </item> + </layout> + </widget> + <resources/> + <connections/> +</ui> diff --git a/milena/sandbox/lazzara/igr/gui/ui/main_window.ui b/milena/sandbox/lazzara/igr/gui/ui/main_window.ui new file mode 100644 index 0000000..75f3327 --- /dev/null +++ b/milena/sandbox/lazzara/igr/gui/ui/main_window.ui @@ -0,0 +1,64 @@ +<ui version="4.0" > + <class>MainWindow</class> + <widget class="QMainWindow" name="MainWindow" > + <property name="geometry" > + <rect> + <x>0</x> + <y>0</y> + <width>487</width> + <height>335</height> + </rect> + </property> + <property name="windowTitle" > + <string>Segmentation tools</string> + </property> + <widget class="QWidget" name="centralwidget" > + <layout class="QGridLayout" name="gridLayout" > + <item row="0" column="0" > + <widget class="QTabWidget" name="tabWidget" > + <property name="currentIndex" > + <number>0</number> + </property> + <widget class="mln::demo::display_seg" name="Visualization" > + <attribute name="title" > + <string>Visualization</string> + </attribute> + </widget> + <widget class="mln::demo::edit_seg" name="Edition" > + <attribute name="title" > + <string>Edition</string> + </attribute> + </widget> + </widget> + </item> + </layout> + </widget> + <widget class="QMenuBar" name="menubar" > + <property name="geometry" > + <rect> + <x>0</x> + <y>0</y> + <width>487</width> + <height>31</height> + </rect> + </property> + </widget> + <widget class="QStatusBar" name="statusbar" /> + </widget> + <customwidgets> + <customwidget> + <class>mln::demo::display_seg</class> + <extends>QWidget</extends> + <header>src/display_seg.hh</header> + <container>1</container> + </customwidget> + <customwidget> + <class>mln::demo::edit_seg</class> + <extends>QWidget</extends> + <header>src/edit_seg.hh</header> + <container>1</container> + </customwidget> + </customwidgets> + <resources/> + <connections/> +</ui> diff --git a/milena/sandbox/lazzara/igr/gui/ui_display_seg.h b/milena/sandbox/lazzara/igr/gui/ui_display_seg.h new file mode 100644 index 0000000..5875534 --- /dev/null +++ b/milena/sandbox/lazzara/igr/gui/ui_display_seg.h @@ -0,0 +1,148 @@ +/******************************************************************************** +** Form generated from reading ui file 'display_seg.ui' +** +** Created: Wed Oct 28 12:45:22 2009 +** by: Qt User Interface Compiler version 4.4.3 +** +** WARNING! All changes made in this file will be lost when recompiling ui file! +********************************************************************************/ + +#ifndef UI_DISPLAY_SEG_H +#define UI_DISPLAY_SEG_H + +#include <QtCore/QVariant> +#include <QtGui/QAction> +#include <QtGui/QApplication> +#include <QtGui/QButtonGroup> +#include <QtGui/QGridLayout> +#include <QtGui/QHBoxLayout> +#include <QtGui/QLabel> +#include <QtGui/QLineEdit> +#include <QtGui/QPushButton> +#include <QtGui/QSpacerItem> +#include <QtGui/QVBoxLayout> +#include <QtGui/QWidget> +#include "src/image_viewer.hh" + +QT_BEGIN_NAMESPACE + +class Ui_DisplaySeg +{ +public: + QGridLayout *gridLayout; + QVBoxLayout *verticalLayout; + QHBoxLayout *horizontalLayout; + QLabel *label; + QLineEdit *filepath; + QPushButton *browseBtn; + QHBoxLayout *horizontalLayout_2; + QLabel *label_2; + QLineEdit *segfilepath; + QPushButton *browseSegBtn; + QHBoxLayout *horizontalLayout_3; + QSpacerItem *horizontalSpacer; + QPushButton *loadBtn; + mln::demo::image_viewer *viewer; + + void setupUi(QWidget *DisplaySeg) + { + if (DisplaySeg->objectName().isEmpty()) + DisplaySeg->setObjectName(QString::fromUtf8("DisplaySeg")); + DisplaySeg->resize(400, 300); + gridLayout = new QGridLayout(DisplaySeg); + gridLayout->setObjectName(QString::fromUtf8("gridLayout")); + verticalLayout = new QVBoxLayout(); + verticalLayout->setObjectName(QString::fromUtf8("verticalLayout")); + horizontalLayout = new QHBoxLayout(); + horizontalLayout->setObjectName(QString::fromUtf8("horizontalLayout")); + label = new QLabel(DisplaySeg); + label->setObjectName(QString::fromUtf8("label")); + + horizontalLayout->addWidget(label); + + filepath = new QLineEdit(DisplaySeg); + filepath->setObjectName(QString::fromUtf8("filepath")); + + horizontalLayout->addWidget(filepath); + + browseBtn = new QPushButton(DisplaySeg); + browseBtn->setObjectName(QString::fromUtf8("browseBtn")); + + horizontalLayout->addWidget(browseBtn); + + + verticalLayout->addLayout(horizontalLayout); + + horizontalLayout_2 = new QHBoxLayout(); + horizontalLayout_2->setObjectName(QString::fromUtf8("horizontalLayout_2")); + label_2 = new QLabel(DisplaySeg); + label_2->setObjectName(QString::fromUtf8("label_2")); + + horizontalLayout_2->addWidget(label_2); + + segfilepath = new QLineEdit(DisplaySeg); + segfilepath->setObjectName(QString::fromUtf8("segfilepath")); + + horizontalLayout_2->addWidget(segfilepath); + + browseSegBtn = new QPushButton(DisplaySeg); + browseSegBtn->setObjectName(QString::fromUtf8("browseSegBtn")); + + horizontalLayout_2->addWidget(browseSegBtn); + + + verticalLayout->addLayout(horizontalLayout_2); + + horizontalLayout_3 = new QHBoxLayout(); + horizontalLayout_3->setObjectName(QString::fromUtf8("horizontalLayout_3")); + horizontalSpacer = new QSpacerItem(48, 17, QSizePolicy::Expanding, QSizePolicy::Minimum); + + horizontalLayout_3->addItem(horizontalSpacer); + + loadBtn = new QPushButton(DisplaySeg); + loadBtn->setObjectName(QString::fromUtf8("loadBtn")); + + horizontalLayout_3->addWidget(loadBtn); + + + verticalLayout->addLayout(horizontalLayout_3); + + viewer = new mln::demo::image_viewer(DisplaySeg); + viewer->setObjectName(QString::fromUtf8("viewer")); + QSizePolicy sizePolicy(QSizePolicy::Expanding, QSizePolicy::Expanding); + sizePolicy.setHorizontalStretch(0); + sizePolicy.setVerticalStretch(0); + sizePolicy.setHeightForWidth(viewer->sizePolicy().hasHeightForWidth()); + viewer->setSizePolicy(sizePolicy); + + verticalLayout->addWidget(viewer); + + + gridLayout->addLayout(verticalLayout, 0, 0, 1, 1); + + + retranslateUi(DisplaySeg); + + QMetaObject::connectSlotsByName(DisplaySeg); + } // setupUi + + void retranslateUi(QWidget *DisplaySeg) + { + DisplaySeg->setWindowTitle(QApplication::translate("DisplaySeg", "Form", 0, QApplication::UnicodeUTF8)); + label->setText(QApplication::translate("DisplaySeg", "Image", 0, QApplication::UnicodeUTF8)); + browseBtn->setText(QApplication::translate("DisplaySeg", "&Browse", 0, QApplication::UnicodeUTF8)); + label_2->setText(QApplication::translate("DisplaySeg", "Segmentation", 0, QApplication::UnicodeUTF8)); + browseSegBtn->setText(QApplication::translate("DisplaySeg", "&Browse", 0, QApplication::UnicodeUTF8)); + loadBtn->setText(QApplication::translate("DisplaySeg", "&Load", 0, QApplication::UnicodeUTF8)); + Q_UNUSED(DisplaySeg); + } // retranslateUi + +}; + +namespace Ui { + class DisplaySeg: public Ui_DisplaySeg {}; +} // namespace Ui + +QT_END_NAMESPACE + +#endif // UI_DISPLAY_SEG_H diff --git a/milena/sandbox/lazzara/igr/gui/ui_edit_seg.h b/milena/sandbox/lazzara/igr/gui/ui_edit_seg.h new file mode 100644 index 0000000..9d8e07e --- /dev/null +++ b/milena/sandbox/lazzara/igr/gui/ui_edit_seg.h @@ -0,0 +1,130 @@ +/******************************************************************************** +** Form generated from reading ui file 'edit_seg.ui' +** +** Created: Wed Oct 28 12:45:22 2009 +** by: Qt User Interface Compiler version 4.4.3 +** +** WARNING! All changes made in this file will be lost when recompiling ui file! +********************************************************************************/ + +#ifndef UI_EDIT_SEG_H +#define UI_EDIT_SEG_H + +#include <QtCore/QVariant> +#include <QtGui/QAction> +#include <QtGui/QApplication> +#include <QtGui/QButtonGroup> +#include <QtGui/QGridLayout> +#include <QtGui/QHBoxLayout> +#include <QtGui/QLabel> +#include <QtGui/QLineEdit> +#include <QtGui/QPushButton> +#include <QtGui/QSpacerItem> +#include <QtGui/QVBoxLayout> +#include <QtGui/QWidget> +#include "src/image_viewer.hh" + +QT_BEGIN_NAMESPACE + +class Ui_EditSeg +{ +public: + QGridLayout *gridLayout; + QVBoxLayout *verticalLayout; + QHBoxLayout *horizontalLayout_2; + QLabel *label_2; + QLineEdit *filepath; + QPushButton *browseBtn; + QHBoxLayout *horizontalLayout_3; + QSpacerItem *horizontalSpacer; + QPushButton *reloadBtn; + QPushButton *saveBtn; + mln::demo::image_viewer *viewer; + + void setupUi(QWidget *EditSeg) + { + if (EditSeg->objectName().isEmpty()) + EditSeg->setObjectName(QString::fromUtf8("EditSeg")); + EditSeg->resize(400, 300); + gridLayout = new QGridLayout(EditSeg); + gridLayout->setObjectName(QString::fromUtf8("gridLayout")); + verticalLayout = new QVBoxLayout(); + verticalLayout->setObjectName(QString::fromUtf8("verticalLayout")); + horizontalLayout_2 = new QHBoxLayout(); + horizontalLayout_2->setObjectName(QString::fromUtf8("horizontalLayout_2")); + label_2 = new QLabel(EditSeg); + label_2->setObjectName(QString::fromUtf8("label_2")); + + horizontalLayout_2->addWidget(label_2); + + filepath = new QLineEdit(EditSeg); + filepath->setObjectName(QString::fromUtf8("filepath")); + + horizontalLayout_2->addWidget(filepath); + + browseBtn = new QPushButton(EditSeg); + browseBtn->setObjectName(QString::fromUtf8("browseBtn")); + + horizontalLayout_2->addWidget(browseBtn); + + + verticalLayout->addLayout(horizontalLayout_2); + + horizontalLayout_3 = new QHBoxLayout(); + horizontalLayout_3->setObjectName(QString::fromUtf8("horizontalLayout_3")); + horizontalSpacer = new QSpacerItem(48, 17, QSizePolicy::Expanding, QSizePolicy::Minimum); + + horizontalLayout_3->addItem(horizontalSpacer); + + reloadBtn = new QPushButton(EditSeg); + reloadBtn->setObjectName(QString::fromUtf8("reloadBtn")); + + horizontalLayout_3->addWidget(reloadBtn); + + saveBtn = new QPushButton(EditSeg); + saveBtn->setObjectName(QString::fromUtf8("saveBtn")); + saveBtn->setEnabled(false); + + horizontalLayout_3->addWidget(saveBtn); + + + verticalLayout->addLayout(horizontalLayout_3); + + viewer = new mln::demo::image_viewer(EditSeg); + viewer->setObjectName(QString::fromUtf8("viewer")); + QSizePolicy sizePolicy(QSizePolicy::Expanding, QSizePolicy::Expanding); + sizePolicy.setHorizontalStretch(0); + sizePolicy.setVerticalStretch(0); + sizePolicy.setHeightForWidth(viewer->sizePolicy().hasHeightForWidth()); + viewer->setSizePolicy(sizePolicy); + + verticalLayout->addWidget(viewer); + + + gridLayout->addLayout(verticalLayout, 0, 0, 1, 1); + + + retranslateUi(EditSeg); + + QMetaObject::connectSlotsByName(EditSeg); + } // setupUi + + void retranslateUi(QWidget *EditSeg) + { + EditSeg->setWindowTitle(QApplication::translate("EditSeg", "Form", 0, QApplication::UnicodeUTF8)); + label_2->setText(QApplication::translate("EditSeg", "Segmentation", 0, QApplication::UnicodeUTF8)); + browseBtn->setText(QApplication::translate("EditSeg", "&Browse", 0, QApplication::UnicodeUTF8)); + reloadBtn->setText(QApplication::translate("EditSeg", "&Reload", 0, QApplication::UnicodeUTF8)); + saveBtn->setText(QApplication::translate("EditSeg", "&Save changes", 0, QApplication::UnicodeUTF8)); + Q_UNUSED(EditSeg); + } // retranslateUi + +}; + +namespace Ui { + class EditSeg: public Ui_EditSeg {}; +} // namespace Ui + +QT_END_NAMESPACE + +#endif // UI_EDIT_SEG_H diff --git a/milena/sandbox/lazzara/igr/gui/ui_image_viewer.h b/milena/sandbox/lazzara/igr/gui/ui_image_viewer.h new file mode 100644 index 0000000..01cc5df --- /dev/null +++ b/milena/sandbox/lazzara/igr/gui/ui_image_viewer.h @@ -0,0 +1,167 @@ +/******************************************************************************** +** Form generated from reading ui file 'image_viewer.ui' +** +** Created: Wed Oct 28 12:45:22 2009 +** by: Qt User Interface Compiler version 4.4.3 +** +** WARNING! All changes made in this file will be lost when recompiling ui file! +********************************************************************************/ + +#ifndef UI_IMAGE_VIEWER_H +#define UI_IMAGE_VIEWER_H + +#include <QtCore/QVariant> +#include <QtGui/QAction> +#include <QtGui/QApplication> +#include <QtGui/QButtonGroup> +#include <QtGui/QGraphicsView> +#include <QtGui/QHBoxLayout> +#include <QtGui/QLabel> +#include <QtGui/QPushButton> +#include <QtGui/QSlider> +#include <QtGui/QSpacerItem> +#include <QtGui/QVBoxLayout> +#include <QtGui/QWidget> + +QT_BEGIN_NAMESPACE + +class Ui_ImageViewer +{ +public: + QVBoxLayout *verticalLayout_2; + QVBoxLayout *verticalLayout; + QHBoxLayout *horizontalLayout_2; + QSpacerItem *horizontalSpacer; + QLabel *zoomLabel; + QPushButton *zoomIn; + QPushButton *zoomOut; + QPushButton *zoomFixed; + QPushButton *zoomOriginal; + QSpacerItem *horizontalSpacer_2; + QGraphicsView *image; + QHBoxLayout *sliderLayout; + QSlider *slider; + QLabel *label_2; + QLabel *frame_nb; + + void setupUi(QWidget *ImageViewer) + { + if (ImageViewer->objectName().isEmpty()) + ImageViewer->setObjectName(QString::fromUtf8("ImageViewer")); + ImageViewer->resize(464, 350); + QSizePolicy sizePolicy(QSizePolicy::Expanding, QSizePolicy::Expanding); + sizePolicy.setHorizontalStretch(0); + sizePolicy.setVerticalStretch(0); + sizePolicy.setHeightForWidth(ImageViewer->sizePolicy().hasHeightForWidth()); + ImageViewer->setSizePolicy(sizePolicy); + verticalLayout_2 = new QVBoxLayout(ImageViewer); + verticalLayout_2->setObjectName(QString::fromUtf8("verticalLayout_2")); + verticalLayout = new QVBoxLayout(); + verticalLayout->setObjectName(QString::fromUtf8("verticalLayout")); + horizontalLayout_2 = new QHBoxLayout(); + horizontalLayout_2->setObjectName(QString::fromUtf8("horizontalLayout_2")); + horizontalSpacer = new QSpacerItem(40, 20, QSizePolicy::Expanding, QSizePolicy::Minimum); + + horizontalLayout_2->addItem(horizontalSpacer); + + zoomLabel = new QLabel(ImageViewer); + zoomLabel->setObjectName(QString::fromUtf8("zoomLabel")); + zoomLabel->setEnabled(false); + + horizontalLayout_2->addWidget(zoomLabel); + + zoomIn = new QPushButton(ImageViewer); + zoomIn->setObjectName(QString::fromUtf8("zoomIn")); + zoomIn->setEnabled(false); + + horizontalLayout_2->addWidget(zoomIn); + + zoomOut = new QPushButton(ImageViewer); + zoomOut->setObjectName(QString::fromUtf8("zoomOut")); + zoomOut->setEnabled(false); + + horizontalLayout_2->addWidget(zoomOut); + + zoomFixed = new QPushButton(ImageViewer); + zoomFixed->setObjectName(QString::fromUtf8("zoomFixed")); + zoomFixed->setEnabled(false); + + horizontalLayout_2->addWidget(zoomFixed); + + zoomOriginal = new QPushButton(ImageViewer); + zoomOriginal->setObjectName(QString::fromUtf8("zoomOriginal")); + zoomOriginal->setEnabled(false); + + horizontalLayout_2->addWidget(zoomOriginal); + + horizontalSpacer_2 = new QSpacerItem(40, 20, QSizePolicy::Expanding, QSizePolicy::Minimum); + + horizontalLayout_2->addItem(horizontalSpacer_2); + + + verticalLayout->addLayout(horizontalLayout_2); + + image = new QGraphicsView(ImageViewer); + image->setObjectName(QString::fromUtf8("image")); + image->setInteractive(true); + image->setRenderHints(QPainter::SmoothPixmapTransform|QPainter::TextAntialiasing); + + verticalLayout->addWidget(image); + + sliderLayout = new QHBoxLayout(); + sliderLayout->setObjectName(QString::fromUtf8("sliderLayout")); + slider = new QSlider(ImageViewer); + slider->setObjectName(QString::fromUtf8("slider")); + slider->setOrientation(Qt::Horizontal); + slider->setTickPosition(QSlider::TicksAbove); + + sliderLayout->addWidget(slider); + + label_2 = new QLabel(ImageViewer); + label_2->setObjectName(QString::fromUtf8("label_2")); + + sliderLayout->addWidget(label_2); + + frame_nb = new QLabel(ImageViewer); + frame_nb->setObjectName(QString::fromUtf8("frame_nb")); + QFont font; + font.setBold(true); + font.setWeight(75); + frame_nb->setFont(font); + + sliderLayout->addWidget(frame_nb); + + + verticalLayout->addLayout(sliderLayout); + + + verticalLayout_2->addLayout(verticalLayout); + + + retranslateUi(ImageViewer); + + QMetaObject::connectSlotsByName(ImageViewer); + } // setupUi + + void retranslateUi(QWidget *ImageViewer) + { + ImageViewer->setWindowTitle(QApplication::translate("ImageViewer", "Form", 0, QApplication::UnicodeUTF8)); + zoomLabel->setText(QApplication::translate("ImageViewer", "Zoom:", 0, QApplication::UnicodeUTF8)); + zoomIn->setText(QApplication::translate("ImageViewer", "+", 0, QApplication::UnicodeUTF8)); + zoomOut->setText(QApplication::translate("ImageViewer", "-", 0, QApplication::UnicodeUTF8)); + zoomFixed->setText(QApplication::translate("ImageViewer", "Fixed width", 0, QApplication::UnicodeUTF8)); + zoomOriginal->setText(QApplication::translate("ImageViewer", "Original size", 0, QApplication::UnicodeUTF8)); + label_2->setText(QApplication::translate("ImageViewer", "Current Frame :", 0, QApplication::UnicodeUTF8)); + frame_nb->setText(QApplication::translate("ImageViewer", "0", 0, QApplication::UnicodeUTF8)); + Q_UNUSED(ImageViewer); + } // retranslateUi + +}; + +namespace Ui { + class ImageViewer: public Ui_ImageViewer {}; +} // namespace Ui + +QT_END_NAMESPACE + +#endif // UI_IMAGE_VIEWER_H diff --git a/milena/sandbox/lazzara/igr/gui/ui_main_window.h b/milena/sandbox/lazzara/igr/gui/ui_main_window.h new file mode 100644 index 0000000..0f1ce23 --- /dev/null +++ b/milena/sandbox/lazzara/igr/gui/ui_main_window.h @@ -0,0 +1,92 @@ +/******************************************************************************** +** Form generated from reading ui file 'main_window.ui' +** +** Created: Wed Oct 28 13:14:49 2009 +** by: Qt User Interface Compiler version 4.4.3 +** +** WARNING! All changes made in this file will be lost when recompiling ui file! +********************************************************************************/ + +#ifndef UI_MAIN_WINDOW_H +#define UI_MAIN_WINDOW_H + +#include <QtCore/QVariant> +#include <QtGui/QAction> +#include <QtGui/QApplication> +#include <QtGui/QButtonGroup> +#include <QtGui/QGridLayout> +#include <QtGui/QMainWindow> +#include <QtGui/QMenuBar> +#include <QtGui/QStatusBar> +#include <QtGui/QTabWidget> +#include <QtGui/QWidget> +#include "src/display_seg.hh" +#include "src/edit_seg.hh" + +QT_BEGIN_NAMESPACE + +class Ui_MainWindow +{ +public: + QWidget *centralwidget; + QGridLayout *gridLayout; + QTabWidget *tabWidget; + mln::demo::display_seg *Visualization; + mln::demo::edit_seg *Edition; + QMenuBar *menubar; + QStatusBar *statusbar; + + void setupUi(QMainWindow *MainWindow) + { + if (MainWindow->objectName().isEmpty()) + MainWindow->setObjectName(QString::fromUtf8("MainWindow")); + MainWindow->resize(487, 335); + centralwidget = new QWidget(MainWindow); + centralwidget->setObjectName(QString::fromUtf8("centralwidget")); + gridLayout = new QGridLayout(centralwidget); + gridLayout->setObjectName(QString::fromUtf8("gridLayout")); + tabWidget = new QTabWidget(centralwidget); + tabWidget->setObjectName(QString::fromUtf8("tabWidget")); + Visualization = new mln::demo::display_seg(); + Visualization->setObjectName(QString::fromUtf8("Visualization")); + tabWidget->addTab(Visualization, QString()); + Edition = new mln::demo::edit_seg(); + Edition->setObjectName(QString::fromUtf8("Edition")); + tabWidget->addTab(Edition, QString()); + + gridLayout->addWidget(tabWidget, 0, 0, 1, 1); + + MainWindow->setCentralWidget(centralwidget); + menubar = new QMenuBar(MainWindow); + menubar->setObjectName(QString::fromUtf8("menubar")); + menubar->setGeometry(QRect(0, 0, 487, 31)); + MainWindow->setMenuBar(menubar); + statusbar = new QStatusBar(MainWindow); + statusbar->setObjectName(QString::fromUtf8("statusbar")); + MainWindow->setStatusBar(statusbar); + + retranslateUi(MainWindow); + + tabWidget->setCurrentIndex(0); + + + QMetaObject::connectSlotsByName(MainWindow); + } // setupUi + + void retranslateUi(QMainWindow *MainWindow) + { + MainWindow->setWindowTitle(QApplication::translate("MainWindow", "Segmentation tools", 0, QApplication::UnicodeUTF8)); + tabWidget->setTabText(tabWidget->indexOf(Visualization), QApplication::translate("MainWindow", "Visualization", 0, QApplication::UnicodeUTF8)); + tabWidget->setTabText(tabWidget->indexOf(Edition), QApplication::translate("MainWindow", "Edition", 0, QApplication::UnicodeUTF8)); + Q_UNUSED(MainWindow); + } // retranslateUi + +}; + +namespace Ui { + class MainWindow: public Ui_MainWindow {}; +} // namespace Ui + +QT_END_NAMESPACE + +#endif // UI_MAIN_WINDOW_H -- 1.5.6.5

1 0

4678: Add new debug routines.
by Guillaume Lazzara 28 Oct '09

28 Oct '09

* debug/alignment_decision_image.hh, * debug/links_decision_image.hh, * debug/save_object_diff.hh, * debug/several_links_decision_image.hh: New. --- scribo/ChangeLog | 9 ++ scribo/debug/alignment_decision_image.hh | 170 +++++++++++++++++++++++ scribo/debug/links_decision_image.hh | 127 ++++++++++++++++++ scribo/debug/save_object_diff.hh | 98 ++++++++++++++ scribo/debug/several_links_decision_image.hh | 185 ++++++++++++++++++++++++++ 5 files changed, 589 insertions(+), 0 deletions(-) create mode 100644 scribo/debug/alignment_decision_image.hh create mode 100644 scribo/debug/links_decision_image.hh create mode 100644 scribo/debug/save_object_diff.hh create mode 100644 scribo/debug/several_links_decision_image.hh diff --git a/scribo/ChangeLog b/scribo/ChangeLog index deee412..5e2d69e 100644 --- a/scribo/ChangeLog +++ b/scribo/ChangeLog @@ -1,5 +1,14 @@ 2009-10-22 Guillaume Lazzara <z(a)lrde.epita.fr> + Add new debug routines. + + * debug/alignment_decision_image.hh, + * debug/links_decision_image.hh, + * debug/save_object_diff.hh, + * debug/several_links_decision_image.hh: New. + +2009-10-22 Guillaume Lazzara <z(a)lrde.epita.fr> + Revamp Sauvola binarization. * binarization/sauvola.hh: Revamp and now returns a threshold diff --git a/scribo/debug/alignment_decision_image.hh b/scribo/debug/alignment_decision_image.hh new file mode 100644 index 0000000..9a4fa50 --- /dev/null +++ b/scribo/debug/alignment_decision_image.hh @@ -0,0 +1,170 @@ +// Copyright (C) 2009 EPITA Research and Development Laboratory (LRDE) +// +// This file is part of Olena. +// +// Olena is free software: you can redistribute it and/or modify it under +// the terms of the GNU General Public License as published by the Free +// Software Foundation, version 2 of the License. +// +// Olena is distributed in the hope that it will be useful, +// but WITHOUT ANY WARRANTY; without even the implied warranty of +// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU +// General Public License for more details. +// +// You should have received a copy of the GNU General Public License +// along with Olena. If not, see <http://www.gnu.org/licenses/>. +// +// As a special exception, you may use this file as part of a free +// software project without restriction. Specifically, if other files +// instantiate templates or use macros or inline functions from this +// file, or you compile this file and link it with other files to produce +// an executable, this file does not by itself cause the resulting +// executable to be covered by the GNU General Public License. This +// exception does not however invalidate any other reasons why the +// executable file might be covered by the GNU General Public License. + +#ifndef SCRIBO_DEBUG_ALIGNMENT_DECISION_IMAGE_HH +# define SCRIBO_DEBUG_ALIGNMENT_DECISION_IMAGE_HH + +/// \file +/// +/// Save a color image showing the difference between to object groups. + +# include <mln/core/concept/image.hh> +# include <mln/data/convert.hh> +# include <mln/value/rgb8.hh> +# include <mln/literal/colors.hh> +# include <mln/util/array.hh> +# include <mln/util/couple.hh> + +# include <scribo/core/object_groups.hh> +# include <scribo/draw/bounding_boxes.hh> + + +namespace scribo +{ + + namespace debug + { + + using namespace mln; + + enum Alignment { top, center, bottom }; + + /*! \brief Save a color image showing the difference between to + object links. + + \input[in] input An image. It's value type must be convertible + towards rgb8. + \input[in] links Object links information. + \input[in] filtered_links A copy of \p links which have been + filtered. + + \return A color image. Non filtered links are drawn in + green. Others are drawn in red. + */ + template <typename I, typename L> + mln_ch_value(I,value::rgb8) + alignment_decision_image(const Image<I>& input_, + const object_links<L>& links, + const object_links<L>& filtered_links, + const Alignment& alignment); + + +# ifndef MLN_INCLUDE_ONLY + + + namespace internal + { + + template <typename L> + mln::util::couple<mln_site(L),mln_site(L)> + find_anchors(const object_image(L)& objects, + unsigned i, + unsigned link_i, + const Alignment& alignment) + { + mln_site(L) + a1 = objects.bbox(i).center(), + a2 = objects.bbox(link_i).center(); + + switch (alignment) + { + case top: + a1.row() = objects.bbox(i).pmin().row(); + a2.row() = objects.bbox(link_i).pmin().row(); + break; + + case center: + break; + + case bottom: + a1.row() = objects.bbox(i).pmax().row(); + a2.row() = objects.bbox(link_i).pmax().row(); + break; + + } + return make::couple(a1, a2); + } + + } + + template <typename I, typename L> + mln_ch_value(I,value::rgb8) + alignment_decision_image(const Image<I>& input_, + const object_links<L>& links, + const object_links<L>& filtered_links, + const Alignment& alignment) + { + trace::entering("scribo::debug::alignment_decision_image"); + const I& input = exact(input_); + + const object_image(L)& objects = links.object_image_(); + + mln_precondition(input.is_valid()); + mln_precondition(links.is_valid()); + mln_precondition(filtered_links.is_valid()); + mln_precondition(links.size() == filtered_links.size()); + mln_precondition(links.object_image_() != filtered_links.object_image_()); + /// Fixme: check that objects has been computed from input. + + image2d<value::rgb8> + decision_image = data::convert(value::rgb8(), input); + + for_all_components(i, objects.bboxes()) + mln::draw::box(decision_image, objects.bbox(i), literal::blue); + + typedef mln_site(L) P; + + for (unsigned i = 1; i < links.size(); ++i) + { + + if (links[i] != i) + { + value::rgb8 value = literal::green; + if (links[i] != filtered_links[i]) + value = literal::red; + + mln::util::couple<P,P> + anchors = internal::find_anchors(objects, i, links[i], alignment); + mln::draw::line(decision_image, + anchors.first(), + anchors.second(), + value); + } + } + + trace::exiting("scribo::debug::alignment_decision_image"); + return decision_image; + } + + + +# endif // ! MLN_INCLUDE_ONLY + + } // end of namespace scribo::debug + +} // end of namespace scribo + + +#endif // ! SCRIBO_DEBUG_ALIGNMENT_DECISION_IMAGE_HH diff --git a/scribo/debug/links_decision_image.hh b/scribo/debug/links_decision_image.hh new file mode 100644 index 0000000..368d9b7 --- /dev/null +++ b/scribo/debug/links_decision_image.hh @@ -0,0 +1,127 @@ +// Copyright (C) 2009 EPITA Research and Development Laboratory (LRDE) +// +// This file is part of Olena. +// +// Olena is free software: you can redistribute it and/or modify it under +// the terms of the GNU General Public License as published by the Free +// Software Foundation, version 2 of the License. +// +// Olena is distributed in the hope that it will be useful, +// but WITHOUT ANY WARRANTY; without even the implied warranty of +// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU +// General Public License for more details. +// +// You should have received a copy of the GNU General Public License +// along with Olena. If not, see <http://www.gnu.org/licenses/>. +// +// As a special exception, you may use this file as part of a free +// software project without restriction. Specifically, if other files +// instantiate templates or use macros or inline functions from this +// file, or you compile this file and link it with other files to produce +// an executable, this file does not by itself cause the resulting +// executable to be covered by the GNU General Public License. This +// exception does not however invalidate any other reasons why the +// executable file might be covered by the GNU General Public License. + +#ifndef SCRIBO_DEBUG_LINKS_DECISION_IMAGE_HH +# define SCRIBO_DEBUG_LINKS_DECISION_IMAGE_HH + +/// \file +/// +/// Save a color image showing the difference between to object groups. + +# include <mln/core/concept/image.hh> +# include <mln/accu/center.hh> +# include <mln/data/convert.hh> +# include <mln/value/rgb8.hh> +# include <mln/literal/colors.hh> +# include <mln/util/array.hh> + +# include <scribo/core/object_groups.hh> +# include <scribo/draw/bounding_boxes.hh> + + +namespace scribo +{ + + namespace debug + { + + using namespace mln; + + /// FIXME: DOC! + template <typename I, typename L> + mln_ch_value(I,value::rgb8) + links_decision_image(const Image<I>& input_, + const object_links<L>& links, + const object_links<L>& filtered_links); + + +# ifndef MLN_INCLUDE_ONLY + + template <typename I, typename L> + mln_ch_value(I,value::rgb8) + links_decision_image(const Image<I>& input_, + const object_links<L>& links, + const object_links<L>& filtered_links) + { + trace::entering("scribo::debug::links_decision_image"); + const I& input = exact(input_); + + const object_image(L)& objects = links.object_image_(); + + mln_precondition(input.is_valid()); + mln_precondition(objects.is_valid()); + mln_precondition(links.is_valid()); + mln_precondition(filtered_links.is_valid()); + mln_precondition(links.size() == filtered_links.size()); + mln_precondition(links.object_image_() != filtered_links.object_image_()); + /// Fixme: check that objects has been computed from input. + + image2d<value::rgb8> + links_decision_image = data::convert(value::rgb8(), input); + + for_all_components(i, objects.bboxes()) + mln::draw::box(links_decision_image, objects.bbox(i), literal::blue); + + // Computing mass centers. + mln::util::array<mln_result(accu::center<mln_psite(I)>)> + mass_centers = labeling::compute(accu::meta::center(), + objects, objects.nlabels()); + + for (unsigned i = 1; i < links.size(); ++i) + { + + if (links[i] != i) + { + value::rgb8 value = literal::green; + if (links[i] != filtered_links[i]) + value = literal::red; + + mln_site(I) + p1 = mass_centers[i], + p2 = p1 + mln::right; // FIXME: not generic + + while (objects(p2) != links[i] && objects.domain().has(p2)) + ++p2.col(); + + mln::draw::line(links_decision_image, + p1, + p2, + value); + } + } + + trace::exiting("scribo::debug::links_decision_image"); + return links_decision_image; + } + + +# endif // ! MLN_INCLUDE_ONLY + + } // end of namespace scribo::debug + +} // end of namespace scribo + + +#endif // ! SCRIBO_DEBUG_LINKS_DECISION_IMAGE_HH diff --git a/scribo/debug/save_object_diff.hh b/scribo/debug/save_object_diff.hh new file mode 100644 index 0000000..e4f49f4 --- /dev/null +++ b/scribo/debug/save_object_diff.hh @@ -0,0 +1,98 @@ +// Copyright (C) 2009 EPITA Research and Development Laboratory (LRDE) +// +// This file is part of Olena. +// +// Olena is free software: you can redistribute it and/or modify it under +// the terms of the GNU General Public License as published by the Free +// Software Foundation, version 2 of the License. +// +// Olena is distributed in the hope that it will be useful, +// but WITHOUT ANY WARRANTY; without even the implied warranty of +// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU +// General Public License for more details. +// +// You should have received a copy of the GNU General Public License +// along with Olena. If not, see <http://www.gnu.org/licenses/>. +// +// As a special exception, you may use this file as part of a free +// software project without restriction. Specifically, if other files +// instantiate templates or use macros or inline functions from this +// file, or you compile this file and link it with other files to produce +// an executable, this file does not by itself cause the resulting +// executable to be covered by the GNU General Public License. This +// exception does not however invalidate any other reasons why the +// executable file might be covered by the GNU General Public License. + +#ifndef SCRIBO_DEBUG_SAVE_OBJECT_DIFF_HH +# define SCRIBO_DEBUG_SAVE_OBJECT_DIFF_HH + +/// \file +/// +/// Show the difference between two object images. + +# include <mln/core/image/image2d.hh> +# include <mln/core/concept/image.hh> +# include <mln/data/fill.hh> +# include <mln/labeling/colorize.hh> +# include <mln/value/rgb8.hh> +# include <mln/io/ppm/save.hh> +# include <mln/literal/black.hh> +# include <mln/literal/colors.hh> +# include <mln/pw/all.hh> +# include <mln/core/image/dmorph/image_if.hh> + +# include <scribo/core/macros.hh> +# include <scribo/core/object_image.hh> + +namespace scribo +{ + + namespace debug + { + + using namespace mln; + + /*! \brief Show the difference between two object images. + + \param[in] lbl An object image. + \param[in] lbl_2 Another object image. + \param[in] filename The output filename. + + */ + template <typename L, typename L2> + void + save_object_diff(const object_image(L)& lbl, const object_image(L2)& lbl_2, + const std::string& filename); + + +# ifndef MLN_INCLUDE_ONLY + + + template <typename L, typename L2> + void + save_object_diff(const object_image(L)& lbl, const object_image(L2)& lbl_2, + const std::string& filename) + { + image2d<value::rgb8> output; + initialize(output, lbl_2); + + data::fill(output, literal::black); + + for_all_components(i, lbl.bboxes()) + data::fill(((output | lbl.bbox(i)).rw() | (pw::value(lbl) == i)).rw(), literal::red); + + for_all_components(i, lbl_2.bboxes()) + data::fill(((output | lbl_2.bbox(i)).rw() | (pw::value(lbl_2) == i)).rw(), literal::green); + + io::ppm::save(output, filename); + } + + +# endif // ! MLN_INCLUDE_ONLY + + + } // end of namespace scribo::debug + +} // end of namespace scribo + +#endif // ! SCRIBO_DEBUG_SAVE_OBJECT_DIFF_HH diff --git a/scribo/debug/several_links_decision_image.hh b/scribo/debug/several_links_decision_image.hh new file mode 100644 index 0000000..ca70d44 --- /dev/null +++ b/scribo/debug/several_links_decision_image.hh @@ -0,0 +1,185 @@ +// Copyright (C) 2009 EPITA Research and Development Laboratory (LRDE) +// +// This file is part of Olena. +// +// Olena is free software: you can redistribute it and/or modify it under +// the terms of the GNU General Public License as published by the Free +// Software Foundation, version 2 of the License. +// +// Olena is distributed in the hope that it will be useful, +// but WITHOUT ANY WARRANTY; without even the implied warranty of +// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU +// General Public License for more details. +// +// You should have received a copy of the GNU General Public License +// along with Olena. If not, see <http://www.gnu.org/licenses/>. +// +// As a special exception, you may use this file as part of a free +// software project without restriction. Specifically, if other files +// instantiate templates or use macros or inline functions from this +// file, or you compile this file and link it with other files to produce +// an executable, this file does not by itself cause the resulting +// executable to be covered by the GNU General Public License. This +// exception does not however invalidate any other reasons why the +// executable file might be covered by the GNU General Public License. + +#ifndef SCRIBO_DEBUG_SEVERAL_LINKS_DECISION_IMAGE_HH +# define SCRIBO_DEBUG_SEVERAL_LINKS_DECISION_IMAGE_HH + +/// \file +/// +/// Save a color image showing the difference between to object groups. + +# include <mln/core/concept/image.hh> +# include <mln/accu/center.hh> +# include <mln/data/convert.hh> +# include <mln/value/rgb8.hh> +# include <mln/literal/colors.hh> +# include <mln/util/array.hh> + +# include <scribo/core/object_groups.hh> +# include <scribo/draw/bounding_boxes.hh> + + +namespace scribo +{ + + namespace debug + { + + using namespace mln; + + /// FIXME: DOC! + template <typename I, typename L> + mln_ch_value(I,value::rgb8) + several_links_decision_image(const Image<I>& input_, + const object_links<L>& links, + const object_links<L>& filtered_links); + + +# ifndef MLN_INCLUDE_ONLY + + + + namespace internal + { + + template <typename L, typename I> + bool + draw_line(const L& objects, I& output, + unsigned link, + const mln_site(L)& p1, const mln_site(L)& p2, + const mln_value(I)& value) + { + + if (objects.domain().has(p2)) + if (objects(p2) == link) + { + mln::draw::line(output, p1, p2, value); + return true; + } + return false; + } + + } + + + + template <typename I, typename L> + mln_ch_value(I,value::rgb8) + several_links_decision_image(const Image<I>& input_, + const object_links<L>& links, + const object_links<L>& filtered_links) + { + trace::entering("scribo::debug::several_links_decision_image"); + const I& input = exact(input_); + + const object_image(L)& objects = links.object_image_(); + + mln_precondition(input.is_valid()); + mln_precondition(objects.is_valid()); + mln_precondition(links.is_valid()); + mln_precondition(filtered_links.is_valid()); + mln_precondition(links.size() == filtered_links.size()); + mln_precondition(links.object_image_() != filtered_links.object_image_()); + /// Fixme: check that objects has been computed from input. + + image2d<value::rgb8> + links_decision_image = data::convert(value::rgb8(), input); + + for_all_components(i, objects.bboxes()) + mln::draw::box(links_decision_image, objects.bbox(i), literal::blue); + + // Computing mass centers. + mln::util::array<mln_result(accu::center<mln_psite(I)>)> + mass_centers = labeling::compute(accu::meta::center(), + objects, objects.nlabels()); + + for (unsigned i = 1; i < links.size(); ++i) + { + + if (links[i] != i) + { + value::rgb8 value = literal::green; + if (links[i] != filtered_links[i]) + value = literal::red; + + mln_site(L) c = objects.bbox(i).center(); + + // Right link from the top anchor. + mln_site(L) a1 = c; + a1.row() = objects.bbox(i).pmin().row() + + (c.row() - objects.bbox(i).pmin().row()) / 4; + + // Right link from the central site + mln_site(I) p1 = mass_centers[i]; + + // Right link from the bottom anchor. + mln_site(L) a2 = c; + a2.row() = objects.bbox(i).pmax().row() + - (c.row() - objects.bbox(i).pmin().row()) / 4; + + mln_site(L) + a1_bak = a1, + a2_bak = a2; + + mln_site(L) tmp; + while(objects.domain().has(a1) + || objects.domain().has(a2) + || objects.domain().has(p1)) + { + if (internal::draw_line(objects, links_decision_image, links[i], + a1_bak, a1, value)) + break; + else + ++a1.col(); + + if (internal::draw_line(objects, links_decision_image, links[i], + mass_centers[i], p1, value)) + break; + else + ++p1.col(); + + if (internal::draw_line(objects, links_decision_image, links[i], + a2_bak, a2, value)) + break; + else + ++a2.col(); + + } + } + } + + trace::exiting("scribo::debug::several_links_decision_image"); + return links_decision_image; + } + + +# endif // ! MLN_INCLUDE_ONLY + + } // end of namespace scribo::debug + +} // end of namespace scribo + + +#endif // ! SCRIBO_DEBUG_SEVERAL_LINKS_DECISION_IMAGE_HH -- 1.5.6.5

1 0

4677: Revamp Sauvola binarization.
by Guillaume Lazzara 28 Oct '09

28 Oct '09

* binarization/sauvola.hh: Revamp and now returns a threshold image. Move parts... * binarization/sauvola_threshold.hh: ... here. New file. * binarization/binarize.hh: New routine. --- scribo/ChangeLog | 11 + scribo/binarization/binarize.hh | 180 +++++++++++ scribo/binarization/sauvola.hh | 307 ++++++-------------- scribo/binarization/sauvola_threshold.hh | 478 ++++++++++++++++++++++++++++++ 4 files changed, 753 insertions(+), 223 deletions(-) create mode 100644 scribo/binarization/binarize.hh create mode 100644 scribo/binarization/sauvola_threshold.hh diff --git a/scribo/ChangeLog b/scribo/ChangeLog index f397523..deee412 100644 --- a/scribo/ChangeLog +++ b/scribo/ChangeLog @@ -1,3 +1,14 @@ +2009-10-22 Guillaume Lazzara <z(a)lrde.epita.fr> + + Revamp Sauvola binarization. + + * binarization/sauvola.hh: Revamp and now returns a threshold + image. Move parts... + + * binarization/sauvola_threshold.hh: ... here. New file. + + * binarization/binarize.hh: New routine. + 2009-10-12 Roland Levillain <roland(a)lrde.epita.fr> * headers.mk, tests/unit_test/unit-tests.mk: Regen. diff --git a/scribo/binarization/binarize.hh b/scribo/binarization/binarize.hh new file mode 100644 index 0000000..0f323bb --- /dev/null +++ b/scribo/binarization/binarize.hh @@ -0,0 +1,180 @@ +// Copyright (C) 2009 EPITA Research and Development Laboratory (LRDE) +// +// This file is part of Olena. +// +// Olena is free software: you can redistribute it and/or modify it under +// the terms of the GNU General Public License as published by the Free +// Software Foundation, version 2 of the License. +// +// Olena is distributed in the hope that it will be useful, +// but WITHOUT ANY WARRANTY; without even the implied warranty of +// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU +// General Public License for more details. +// +// You should have received a copy of the GNU General Public License +// along with Olena. If not, see <http://www.gnu.org/licenses/>. +// +// As a special exception, you may use this file as part of a free +// software project without restriction. Specifically, if other files +// instantiate templates or use macros or inline functions from this +// file, or you compile this file and link it with other files to produce +// an executable, this file does not by itself cause the resulting +// executable to be covered by the GNU General Public License. This +// exception does not however invalidate any other reasons why the +// executable file might be covered by the GNU General Public License. + +#ifndef SCRIBO_BINARIZATION_BINARIZE_HH +# define SCRIBO_BINARIZATION_BINARIZE_HH + +# include <mln/core/concept/image.hh> +# include <mln/value/concept/vectorial.hh> + +/// \file +/// +/// Binarize an image from a threshold image. + +namespace scribo +{ + + using namespace mln; + + + namespace binarization + { + + namespace internal + { + + template <typename I, typename T> + void + binarize_tests(const Image<I>& input, const Image<T>& threshold) + { + mln_precondition(exact(input).is_valid()); + mln_precondition(exact(threshold).is_valid()); + mln_precondition(exact(input).domain() == exact(threshold).domain()); + mlc_is_not_a(mln_value(I), value::Vectorial)::check(); + (void) input; + (void) threshold; + } + + } // end of namespace scribo::binarization::internal + + + namespace impl + { + + namespace generic + { + + template <typename I, typename T> + mln_ch_value(I, bool) + binarize(const Image<I>& input_, const Image<T>& threshold_) + { + trace::entering("scribo::binarization::impl::generic::binarize"); + + internal::binarize_tests(input_, threshold_); + + const I& input = exact(input_); + const T& threshold = exact(threshold_); + + mln_ch_value(I, bool) output; + initialize(output, input); + + mln_piter(I) p(input.domain()); + for_all(p) + output(p) = (input(p) <= threshold(p)); + + + trace::exiting("scribo::binarization::impl::generic::binarize"); + return output; + } + + + } // end of namespace scribo::binarization::impl::generic + + + template <typename I, typename T> + mln_ch_value(I, bool) + binarize_fastest(const Image<I>& input_, const Image<T>& threshold_) + { + trace::entering("scribo::binarization::impl::generic::binarize_fastest"); + internal::binarize_tests(input_, threshold_); + + const I& input = exact(input_); + const T& threshold = exact(threshold_); + + typedef mln_ch_value(I, bool) O; + O output; + initialize(output, input); + + mln_pixter(const I) pi(input); + mln_pixter(const T) pt(threshold); + mln_pixter(O) po(output); + for_all_3(pi, pt, po) + po.val() = pi.val() <= pt.val(); + + trace::exiting("scribo::binarization::impl::generic::binarize_fastest"); + return output; + } + + + + } // end of namespace scribo::binarization::impl + + + namespace internal + { + + template <typename I, typename T> + mln_ch_value(I, bool) + binarize_dispatch(trait::image::value_alignment::any, + trait::image::speed::any, + const Image<I>& input, const Image<T>& threshold) + { + return impl::generic::binarize(input, threshold); + } + + + template <typename I, typename T> + mln_ch_value(I, bool) + binarize_dispatch(trait::image::value_alignment::with_grid, + trait::image::speed::fastest, + const Image<I>& input, const Image<T>& threshold) + { + return impl::binarize_fastest(input, threshold); + } + + template <typename I, typename T> + mln_ch_value(I, bool) + binarize_dispatch(const Image<I>& input, const Image<T>& threshold) + { + return binarize_dispatch(mln_trait_image_value_alignment(I)(), + mln_trait_image_speed(I)(), + exact(input), exact(threshold)); + } + + } // end of namespace scribo::binarization::internal + + + template <typename I, typename T> + mln_ch_value(I, bool) + binarize(const Image<I>& input, const Image<T>& threshold) + { + trace::entering("scribo::binarization::binarize"); + + internal::binarize_tests(input, threshold); + + mln_ch_value(I, bool) + output = internal::binarize_dispatch(input, threshold); + + trace::exiting("scribo::binarization::binarize"); + return output; + } + + + } // end of namespace scribo::binarization + +} // end of namespace scribo + + +#endif // ! SCRIBO_BINARIZATION_BINARIZE_HH diff --git a/scribo/binarization/sauvola.hh b/scribo/binarization/sauvola.hh index b9f78f8..5323847 100644 --- a/scribo/binarization/sauvola.hh +++ b/scribo/binarization/sauvola.hh @@ -28,21 +28,15 @@ /// \file /// -/// Convert an image into a binary image. - -# include <algorithm> -# include <cmath> - -# include <mln/core/image/image2d.hh> -# include <mln/value/rgb8.hh> -# include <mln/value/int_u.hh> -# include <mln/value/int_u8.hh> +/// +# include <mln/core/concept/image.hh> # include <mln/data/transform.hh> -# include <mln/pw/all.hh> -# include <mln/core/routine/duplicate.hh> - +# include <mln/value/int_u8.hh> +# include <mln/value/rgb8.hh> +# include <scribo/binarization/sauvola_threshold.hh> +# include <scribo/binarization/binarize.hh> namespace scribo @@ -53,104 +47,31 @@ namespace scribo using namespace mln; + /*! \brief Convert an image into a binary image. - \input[in] An image. + \input[in] input An image. + \input[in] window_size The window size. \return A binary image. */ template <typename I> - mln_ch_value(I,bool) - sauvola(const Image<I>& input); - - - -# ifndef MLN_INCLUDE_ONLY - - - namespace internal - { - - template <typename T> - class integral_image - { - public: - - template<class F> - integral_image(const image2d<T>& i, F func) - : img_(0), - nrows_(i.nrows()), - ncols_(i.ncols()) - { - img_ = (unsigned long long**)malloc(sizeof(unsigned long long*) * nrows_); - for (int n = 0; n < nrows_; ++n) - img_[n] = (unsigned long long*)malloc(sizeof(unsigned long long) * ncols_); - - img_[0][0] = func(i.at_(0, 0)); - - for (int row = 1; row < nrows_; ++row) - img_[row][0] = (*this)(row - 1, 0) + func(i.at_(row, 0)); - - for (int col = 1; col < ncols_; ++col) - img_[0][col] = (*this)(0, col - 1) - + func(i.at_(0, col)); - - for (int row = 1; row < nrows_; ++row) - for (int col = 1; col < ncols_; ++col) - img_[row][col] = (*this)(row - 1, col) - + (*this)(row, col - 1) - - (*this)(row - 1, col - 1) - + func(i.at_(row, col)); - } - - ~integral_image() - { - for (int n = 0; n < nrows_; ++n) - free(img_[n]); - free(img_); - } - - unsigned long long operator()(int row, int col) const - { - return img_[row][col]; - } - - private: - unsigned long long** img_; - int nrows_; - int ncols_; - }; - - - struct rgb8_to_int_u8 : Function_v2v< rgb8_to_int_u8 > - { - typedef value::int_u8 result; - result operator()(const value::rgb8& c) const - { - return (c.red() + c.green() + c.blue()) / 3; - } - }; - - - unsigned long long square_(const value::int_u8& val) - { - unsigned long long v = static_cast<unsigned long long>(val); - return v * v; - } - - unsigned long long identity_(const value::int_u8& val) - { - return static_cast<unsigned long long>(val); - } - - } // end of namespace scribo::binarization::internal + mln_ch_value(I, bool) + sauvola(const Image<I>& input, unsigned window_size); + /// \overload + /// The window size is set to 11. + // + template <typename I> + mln_ch_value(I, bool) + sauvola(const Image<I>& input); - // Implementation +# ifndef MLN_INCLUDE_ONLY + // Implementations. namespace impl { @@ -159,73 +80,16 @@ namespace scribo { template <typename I> - inline mln_ch_value(I, bool) - sauvola(const I& input) + sauvola(const Image<I>& input, unsigned window_size) { trace::entering("scribo::binarization::impl::generic::sauvola"); + mln_precondition(exact(input).is_valid()); - typedef mln_value(I) V; - - // Value of the window size - const unsigned int w = 11; - - // Control the threshold value in the local window - // The higher, the lower the threshold form the local - // mean m(x, y). Badekas et al. said 0.34 was best. - const double k = 0.34; - - // Maximum value of the standard deviation (128 for - // grayscale documents). - const double R = 128; - - // Compute the sum of all intensities of input - internal::integral_image<V> simple(input, internal::identity_); - - // Compute the sum of all squared intensities of input - internal::integral_image<V> squared(input, internal::square_); - - int w_2 = w >> 1; - - // Savaula Algorithm with I.I. - - image2d<bool> output; - initialize(output, input); - - const def::coord nrows = static_cast<def::coord>(input.nrows()); - const def::coord ncols = static_cast<def::coord>(input.ncols()); - - for(def::coord row = 0; row < nrows; ++row) - for(def::coord col = 0; col < ncols; ++col) - { - int row_min = std::max(0, row - w_2); - int col_min = std::max(0, col - w_2); - int row_max = std::min(nrows - 1, row + w_2); - int col_max = std::min(ncols - 1, col + w_2); - - double wh = (row_max - row_min + 1) * (col_max - col_min + 1); - - // Mean. - double m_x_y_tmp = (simple(row_max, col_max) - + simple(row_min, col_min) - - simple(row_max, col_min) - - simple(row_min, col_max)); - - double m_x_y = m_x_y_tmp / wh; - - // Standard deviation. - double s_x_y_tmp = (squared(row_max, col_max) - + squared(row_min, col_min) - - squared(row_max, col_min) - - squared(row_min, col_max)); - - double s_x_y = std::sqrt((s_x_y_tmp - (m_x_y_tmp * m_x_y_tmp) / wh) / (wh - 1.f)); - - // Thresholding. - double t_x_y = m_x_y * (1.0 + k * ((s_x_y / R) - 1.0)); - - output.at_(row, col) = (input.at_(row, col) < t_x_y); - } + mln_ch_value(I, bool) + output = binarize(input, + binarization::sauvola_threshold(input, + window_size)); trace::exiting("scribo::binarization::impl::generic::sauvola"); return output; @@ -234,98 +98,95 @@ namespace scribo } // end of namespace scribo::binarization::impl::generic - template <typename I> - inline - mln_ch_value(I, bool) - sauvola_gl(const I& input) - { - return impl::generic::sauvola(input); - } + template <typename I> + mln_ch_value(I, bool) + sauvola_rgb8(const Image<I>& input, unsigned window_size) + { + trace::entering("scribo::binarization::impl::generic::sauvola"); + mln_precondition(exact(input).is_valid()); + mln_ch_value(I, value::int_u8) gima; + gima = data::transform(input, internal::rgb8_to_int_u8()); - template <typename I> - inline mln_ch_value(I, bool) - sauvola_rgb8(const I& input) - { - trace::entering("scribo::binarization::impl::sauvola_rgb8"); + output = binarize(gima, + binarization::sauvola_threshold(gima, + window_size)); - mln_ch_value(I, value::int_u8) gima; - gima = data::transform(input, - internal::rgb8_to_int_u8()); + trace::exiting("scribo::binarization::impl::generic::sauvola"); + return output; + } - mln_ch_value(I, bool) output = impl::generic::sauvola(gima); + } // end of namespace scribo::binarization::impl - trace::exiting("scribo::binarization::impl::sauvola_rgb8"); - return output; - } - } // end of namespace scribo::binarization::impl + // Dispatch + namespace internal + { + template <typename I> + mln_ch_value(I, bool) + sauvola_dispatch(const mln_value(I)&, + const Image<I>& input, unsigned window_size) + { + return impl::generic::sauvola(input, window_size); + } + template <typename I> + mln_ch_value(I, bool) + sauvola_dispatch(const value::rgb8&, + const Image<I>& input, unsigned window_size) + { + return impl::sauvola_rgb8(input, window_size); + } - // Dispatch - namespace internal + template <typename I> + mln_ch_value(I, bool) + sauvola_dispatch(const Image<I>& input, unsigned window_size) { + typedef mln_value(I) V; + return sauvola_dispatch(V(), input, window_size); + } - template <typename I, unsigned n> - inline - mln_ch_value(I, bool) - sauvola_dispatch(const value::int_u<n>&, const I& input) - { - return impl::sauvola_gl(input); - } - - template <typename I> - inline - mln_ch_value(I, bool) - sauvola_dispatch(const value::rgb8&, const I& input) - { - return impl::sauvola_rgb8(input); - } + } // end of namespace scribo::binarization::internal - template <typename I> - inline - mln_ch_value(I, bool) - sauvola_dispatch(const mln_value(I)&, const I& input) - { - // No dispatch for this kind of value type. - mlc_abort(I)::check(); - typedef mln_ch_value(I,bool) output_t; - return output_t(); - } + // Facades - } // end of namespace scribo::binarization::internal + template <typename I> + mln_ch_value(I, bool) + sauvola(const Image<I>& input, unsigned window_size) + { + trace::entering("scribo::binarization::sauvola"); + mln_precondition(exact(input).is_valid()); - template <typename I> - inline mln_ch_value(I, bool) - sauvola(const Image<I>& input) - { - trace::entering("scribo::binarization::sauvola"); + output = internal::sauvola_dispatch(input, window_size); - mln_precondition(mln_site_(I)::dim == 2); - mln_precondition(exact(input).is_valid()); + trace::exiting("scribo::binarization::sauvola"); + return output; + } - typedef mln_value(I) value_t; - mln_ch_value(I, bool) - output = internal::sauvola_dispatch(value_t(), exact(input)); - trace::exiting("scribo::text::ppm2pbm"); - return output; - } + template <typename I> + mln_ch_value(I, bool) + sauvola(const Image<I>& input) + { + return sauvola(input, 11); + } + # endif // ! MLN_INCLUDE_ONLY + } // end of namespace scribo::binarization } // end of namespace scribo -#endif // ! SCRIBO_TEXT_PPM2PBM_HH +#endif // ! SCRIBO_BINARIZATION_SAUVOLA_HH diff --git a/scribo/binarization/sauvola_threshold.hh b/scribo/binarization/sauvola_threshold.hh new file mode 100644 index 0000000..9a9e439 --- /dev/null +++ b/scribo/binarization/sauvola_threshold.hh @@ -0,0 +1,478 @@ +// Copyright (C) 2009 EPITA Research and Development Laboratory (LRDE) +// +// This file is part of Olena. +// +// Olena is free software: you can redistribute it and/or modify it under +// the terms of the GNU General Public License as published by the Free +// Software Foundation, version 2 of the License. +// +// Olena is distributed in the hope that it will be useful, +// but WITHOUT ANY WARRANTY; without even the implied warranty of +// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU +// General Public License for more details. +// +// You should have received a copy of the GNU General Public License +// along with Olena. If not, see <http://www.gnu.org/licenses/>. +// +// As a special exception, you may use this file as part of a free +// software project without restriction. Specifically, if other files +// instantiate templates or use macros or inline functions from this +// file, or you compile this file and link it with other files to produce +// an executable, this file does not by itself cause the resulting +// executable to be covered by the GNU General Public License. This +// exception does not however invalidate any other reasons why the +// executable file might be covered by the GNU General Public License. + +#ifndef SCRIBO_BINARIZATION_SAUVOLA_THRESHOLD_HH +# define SCRIBO_BINARIZATION_SAUVOLA_THRESHOLD_HH + +/// \file +/// +/// Convert an image into a binary image. + +/// \fixme return type too restrictive! + +# include <algorithm> +# include <cmath> + +# include <mln/core/image/image2d.hh> +# include <mln/value/rgb8.hh> +# include <mln/value/int_u.hh> +# include <mln/value/int_u8.hh> + +# include <mln/data/transform.hh> +# include <mln/pw/all.hh> +# include <mln/core/routine/duplicate.hh> + + +// Forward declaration. +namespace mln { template <typename T> class integral_image; } + + +namespace scribo +{ + + namespace binarization + { + + using namespace mln; + + /*! \brief Compute a threshold image with Sauvola's algorithm. + + \input[in] input An image. + \input[in] window_size The window size.x + \input[out] simple The sum of all intensities of \p input. + \input[out] squared The sum of all squared intensities of \p + input. + + \return An image of local thresholds. + + */ + template <typename I, typename T> + mln_ch_value(I, value::int_u8) + sauvola_threshold(const Image<I>& input, unsigned window_size, + integral_image<T>& simple, + integral_image<T>& squared); + + + /// \overload + template <typename I> + mln_ch_value(I, value::int_u8) + sauvola_threshold(const Image<I>& input, unsigned window_size); + + + /// \overload + /// The window size is set to 11. + // + template <typename I> + mln_ch_value(I, value::int_u8) + sauvola_threshold(const Image<I>& input); + + + +# ifndef MLN_INCLUDE_ONLY + + + namespace internal + { + + struct rgb8_to_int_u8 : Function_v2v< rgb8_to_int_u8 > + { + typedef value::int_u8 result; + result operator()(const value::rgb8& c) const + { + return (c.red() + c.green() + c.blue()) / 3; + } + }; + + + unsigned long long square_(const value::int_u8& val) + { + unsigned long long v = static_cast<unsigned long long>(val); + return v * v; + } + + unsigned long long identity_(const value::int_u8& val) + { + return static_cast<unsigned long long>(val); + } + + + /// \brief Compute a point wise threshold according Sauvola's + /// binarization. + /// + /// \param[in] p A site. + /// \param[in] simple An integral image of mean values. + /// \param[in] squared An integral image of squared mean values. + /// \param[in] win_width Window width. + /// \param[in] k Control the threshold value in the local + /// window. The higher, the lower the threshold + /// form the local mean m(x, y). + /// \param[in] R Maximum value of the standard deviation (128 + /// for grayscale documents). + + template <typename P, typename T> + double + compute_sauvola_threshold(const P& p, + const integral_image<T>& simple, + const integral_image<T>& squared, + int win_width, double k, double R) + { + mln_precondition(simple.nrows() == squared.nrows()); + mln_precondition(simple.ncols() == squared.ncols()); + + // Window half width. + int w_2 = win_width >> 1; + + int row_min = std::max(0, p.row() - w_2); + int col_min = std::max(0, p.col() - w_2); + int row_max = std::min(simple.nrows() - 1, p.row() + w_2); + int col_max = std::min(simple.ncols() - 1, p.col() + w_2); + + double wh = (row_max - row_min + 1) * (col_max - col_min + 1); + + // Mean. + double m_x_y_tmp = (simple(row_max, col_max) + + simple(row_min, col_min) + - simple(row_max, col_min) + - simple(row_min, col_max)); + + double m_x_y = m_x_y_tmp / wh; + + // Standard deviation. + double s_x_y_tmp = (squared(row_max, col_max) + + squared(row_min, col_min) + - squared(row_max, col_min) + - squared(row_min, col_max)); + + double s_x_y = std::sqrt((s_x_y_tmp - (m_x_y_tmp * m_x_y_tmp) / wh) / (wh - 1.f)); + + // Thresholding. + double t_x_y = m_x_y * (1.0 + k * ((s_x_y / R) - 1.0)); + + return t_x_y; + } + + + template <typename P, typename T> + double + compute_sauvola_threshold(const P& p, + const integral_image<T>& simple, + const integral_image<T>& squared, + int win_width) + { + // Badekas et al. said 0.34 was best. + const double k = 0.34; + + // 128 is best for grayscale documents. + const double R = 128; + + return compute_sauvola_threshold(p, simple, squared, win_width, k, R); + } + + + } // end of namespace scribo::binarization::internal + + } // end of namespace scribo::binarization + +} // end of namespace scribo + + +namespace mln +{ + + template <typename T> + class integral_image + { + public: + + integral_image() + : img_(0), nrows_(0), ncols_(0) + {} + + template<class F> + integral_image(const image2d<T>& i, F func) + : img_(0), + nrows_(0), + ncols_(0) + { + init_(i, func); + } + + template<class F> + void init_(const image2d<T>& i, F func) + { + nrows_ = i.nrows(); + ncols_ = i.ncols(); + + img_ = (unsigned long long**)malloc(sizeof(unsigned long long*) * nrows_); + for (int n = 0; n < nrows_; ++n) + img_[n] = (unsigned long long*)malloc(sizeof(unsigned long long) * ncols_); + + img_[0][0] = func(i.at_(0, 0)); + + for (int row = 1; row < nrows_; ++row) + img_[row][0] = (*this)(row - 1, 0) + func(i.at_(row, 0)); + + for (int col = 1; col < ncols_; ++col) + img_[0][col] = (*this)(0, col - 1) + + func(i.at_(0, col)); + + for (int row = 1; row < nrows_; ++row) + for (int col = 1; col < ncols_; ++col) + img_[row][col] = (*this)(row - 1, col) + + (*this)(row, col - 1) + - (*this)(row - 1, col - 1) + + func(i.at_(row, col)); + } + + + ~integral_image() + { + for (int n = 0; n < nrows_; ++n) + free(img_[n]); + free(img_); + } + + bool is_valid() const + { + return img_ != 0; + } + + unsigned long long operator()(int row, int col) const + { + return img_[row][col]; + } + + int nrows() const + { + return nrows_; + } + + int ncols() const + { + return ncols_; + } + + + private: + unsigned long long** img_; + int nrows_; + int ncols_; + }; + +} // end of namespace mln + + + +namespace scribo +{ + + namespace binarization + { + + // Implementation + + + namespace impl + { + + namespace generic + { + + template <typename I, typename T> + inline + mln_concrete(I) + sauvola_threshold(const I& input, unsigned window_size, + integral_image<T>& simple, + integral_image<T>& squared) + { + trace::entering("scribo::binarization::impl::generic::sauvola_threshold"); + + typedef mln_value(I) V; + typedef mln_site(I) P; + + // Compute the sum of all intensities of input + simple.init_(input, internal::identity_); + + // Compute the sum of all squared intensities of input + squared.init_(input, internal::square_); + + // Savaula Algorithm with I.I. + + mln_concrete(I) output; + initialize(output, input); + + const def::coord nrows = static_cast<def::coord>(input.nrows()); + const def::coord ncols = static_cast<def::coord>(input.ncols()); + + for(def::coord row = 0; row < nrows; ++row) + for(def::coord col = 0; col < ncols; ++col) + output.at_(row, col) + = internal::compute_sauvola_threshold(P(row, col), simple, + squared, window_size); + + trace::exiting("scribo::binarization::impl::generic::sauvola_threshold"); + return output; + } + + } // end of namespace scribo::binarization::impl::generic + + + + template <typename I, typename T> + inline + mln_concrete(I) + sauvola_threshold_gl(const I& input, unsigned window_size, + integral_image<T>& simple, + integral_image<T>& squared) + { + return impl::generic::sauvola_threshold(input, window_size, + simple, squared); + } + + + template <typename I, typename T> + inline + mln_ch_value(I, value::int_u8) + sauvola_threshold_rgb8(const I& input, unsigned window_size, + integral_image<T>& simple, + integral_image<T>& squared) + { + trace::entering("scribo::binarization::impl::sauvola_threshold_rgb8"); + + mln_ch_value(I, value::int_u8) gima; + gima = data::transform(input, + internal::rgb8_to_int_u8()); + + mln_ch_value(I, value::int_u8) + output = impl::generic::sauvola_threshold(gima, window_size, + simple, squared); + + trace::exiting("scribo::binarization::impl::sauvola_threshold_rgb8"); + return output; + } + + + } // end of namespace scribo::binarization::impl + + + + + // Dispatch + + namespace internal + { + + template <unsigned n, typename I, typename T> + inline + mln_ch_value(I, value::int_u<n>) + sauvola_threshold_dispatch(const value::int_u<n>&, const I& input, + unsigned window_size, + integral_image<T>& simple, + integral_image<T>& squared) + { + return impl::sauvola_threshold_gl(input, window_size, simple, squared); + } + + template <typename I, typename T> + inline + mln_ch_value(I, value::int_u8) + sauvola_threshold_dispatch(const value::rgb8&, const I& input, + unsigned window_size, + integral_image<T>& simple, + integral_image<T>& squared) + { + return impl::sauvola_threshold_rgb8(input, window_size, + simple, squared); + } + + template <typename I, typename T> + inline + mln_ch_value(I, value::int_u8) + sauvola_threshold_dispatch(const mln_value(I)&, const I& input, + unsigned window_size, + integral_image<T>& simple, + integral_image<T>& squared) + { + // No dispatch for this kind of value type. + mlc_abort(I)::check(); + + typedef mln_ch_value(I,bool) output_t; + return output_t(); + } + + + } // end of namespace scribo::binarization::internal + + + + template <typename I, typename T> + mln_ch_value(I, value::int_u8) + sauvola_threshold(const Image<I>& input, unsigned window_size, + integral_image<T>& simple, + integral_image<T>& squared) + { + trace::entering("scribo::binarization::sauvola_threshold"); + + mln_precondition(mln_site_(I)::dim == 2); + mln_precondition(exact(input).is_valid()); + + typedef mln_value(I) value_t; + mln_ch_value(I, value::int_u8) + output = internal::sauvola_threshold_dispatch(value_t(), exact(input), + window_size, simple, + squared); + + trace::exiting("scribo::text::ppm2pbm"); + return output; + } + + + template <typename I> + inline + mln_ch_value(I, value::int_u8) + sauvola_threshold(const Image<I>& input, unsigned window_size) + { + mln::integral_image<value::int_u8> simple, squared; + return sauvola_threshold(input, window_size, simple, squared); + } + + + template <typename I> + inline + mln_ch_value(I, value::int_u8) + sauvola_threshold(const Image<I>& input) + { + return sauvola_threshold(input, 11); + } + + +# endif // ! MLN_INCLUDE_ONLY + + } // end of namespace scribo::binarization + +} // end of namespace scribo + + +#endif // ! SCRIBO_BINARIZATION_SAUVOLA_THRESHOLD_HH -- 1.5.6.5

1 0