https://svn.lrde.epita.fr/svn/oln/trunk/milena/sandbox Index: ChangeLog from Ugo Jardonnet <ugo.jardonnet@lrde.epita.fr> Work around different class but same parent(p) value. * jardonnet/n_cmpt/n_cmpt5.cc: Same as v4. * jardonnet/n_cmpt/n_cmpt5.hh: Same as v4. Use iota image. * jardonnet/n_cmpt/Makefile: Add n_cmpt5 rules. * jardonnet/TODO: Cleanup. TODO | 27 ------ n_cmpt/Makefile | 8 +- n_cmpt/n_cmpt5.cc | 48 ++++++++++++ n_cmpt/n_cmpt5.hh | 212 ++++++++++++++++++++++++++++++++++++++++++++++++++++++ 4 files changed, 267 insertions(+), 28 deletions(-) Index: jardonnet/n_cmpt/n_cmpt5.cc --- jardonnet/n_cmpt/n_cmpt5.cc (revision 0) +++ jardonnet/n_cmpt/n_cmpt5.cc (revision 0) @@ -0,0 +1,48 @@ + +#include <iostream> + +#include <mln/core/image/image2d.hh> +#include <mln/core/alias/neighb2d.hh> +#include <mln/value/int_u8.hh> + +#include <mln/make/image.hh> +#include <mln/core/alias/neighb1d.hh> + +#include <mln/io/pgm/load.hh> +#include <mln/io/pgm/save.hh> + +#include "n_cmpt5.hh" + +using namespace mln; +using namespace mln::value; + +bool usage(int argc, char ** argv) +{ + if (argc != 3) + { + std::cout << argv[0] << " ima.pgm lambda" << std::endl; + return false; + } + return true; +} + +int main(int argc, char ** argv) +{ + if (not usage(argc,argv)) + return 1; + + image2d<int_u8> ima; + io::pgm::load(ima, argv[1]); + unsigned lambda = atoi(argv[2]); + + ima(point2d(0,3)) = 106; + + int_u8 tab[] = {2,3,1,0,2,3,4,5,1,1,0,5,6,8,7,1,1,2,3,4}; + image1d<int_u8> ima1= make::image(tab); + + // std::cout << "/output/" << std::endl; + // debug::println(n_cmpt::n_cmpt3(ima1, c2(), lambda)); + + io::pgm::save(n_cmpt::n_cmpt3(ima, c4(), lambda), + "out.pgm"); +} Index: jardonnet/n_cmpt/n_cmpt5.hh --- jardonnet/n_cmpt/n_cmpt5.hh (revision 0) +++ jardonnet/n_cmpt/n_cmpt5.hh (revision 0) @@ -0,0 +1,212 @@ +// Copyright (C) 2008 EPITA Research and Development Laboratory +// +// This file is part of the Olena Library. This library is free +// software; you can redistribute it and/or modify it under the terms +// of the GNU General Public License version 2 as published by the +// Free Software Foundation. +// +// This library is distributed in the hope that it will be useful, +// but WITHOUT ANY WARRANTY; without even the implied warranty of +// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU +// General Public License for more details. +// +// You should have received a copy of the GNU General Public License +// along with this library; see the file COPYING. If not, write to +// the Free Software Foundation, 51 Franklin Street, Fifth Floor, +// Boston, MA 02111-1307, USA. +// +// As a special exception, you may use this file as part of a free +// software library without restriction. Specifically, if other files +// instantiate templates or use macros or inline functions from this +// file, or you compile this file and link it with other files to +// produce an executable, this file does not by itself cause the +// resulting executable to be covered by the GNU General Public +// License. This exception does not however invalidate any other +// reasons why the executable file might be covered by the GNU General +// Public License. + +#ifndef MLN_N_CMPT3_HH +# define MLN_N_CMPT3_HH + +# include <mln/labeling/regional_minima.hh> +# include <mln/core/alias/neighb2d.hh> +# include <mln/util/set.hh> + +# include <mln/debug/println.hh> +# include <mln/debug/iota.hh> + +# include <mln/accu/volume.hh> +# include <mln/morpho/tree/data.hh> +# include <mln/morpho/tree/compute_attribute_image.hh> + +namespace mln +{ + + namespace n_cmpt + { + + template < typename I > + void n_cmpt3(const I& (((((((ima)))))))); + +# ifndef MLN_INCLUDE_ONLY + + template <typename I> + inline + mln_psite(I) + find_root(I& parent, + const mln_psite(I)& x) + { + if (parent(x) == x) + return x; + else + return parent(x) = find_root(parent, parent(x)); + } + + template < typename I, typename N> + I + n_cmpt3(const I& ima, const N& nbh, + unsigned lambda) + { + unsigned label; + + std::cout << "/ima/" << std::endl; + debug::println(ima); + /* + // get /ima/ regional minima + mln_ch_value(I, unsigned) min = labeling::regional_minima(ima, nbh, label); + std::cout << "/ima/ regional minima" << std::endl; + debug::println(min); +*/ + // compute volume image + typedef p_array<mln_psite(I)> S; + typedef mln_ch_value(I,unsigned) V; + typedef accu::volume<I> A; + + S sp = level::sort_psites_decreasing(ima); + morpho::tree::data<I,S> t(ima, sp, nbh); + V volume = morpho::tree::compute_attribute_image(A(), t); + sp = level::sort_psites_increasing(volume); + std::cout << "/volume/" << std::endl; + debug::println(volume); + + // get /volume/ regional minima + mln_ch_value(I, unsigned) min_v = labeling::regional_minima(volume, nbh, label); + std::cout << "/volume/ regional minima" << std::endl; + debug::println(min_v); + + // tester minima de ima == minima de attr + //mln_assertion(min == min_v); + + mln_ch_value(I, bool) fused; + initialize(fused, volume); + mln::level::fill(fused, false); + + // number of minima + unsigned cmpts = label; + + if (lambda > cmpts) + std::cout << "warning : lambda value is to hight." << std::endl; + + // prepare union find + typedef mln_psite(V) P; + //data + mln_ch_value(V, accu::volume<V>) data(volume.domain()); + //deja_vu + mln_ch_value(V, bool) deja_vu(volume.domain()); + mln::level::fill(deja_vu, false); + //parent + mln_ch_value(V, P) parent(volume.domain()); + { + mln_fwd_piter(S) p(sp); + for_all(p) + { + parent(p) = p; + if (min_v(p) != 0) // p in a reg min of the attribute image + fused(p) = true; // ok + } + } + + std::cout << "cmpts | volume_set | " << std::endl; + std::cout << cmpts << " : "; + std::cout << std::endl; + + // union find sur volume + mln_fwd_piter(S) p(sp); + mln_niter(N) n(nbh, p); + for_all(p) + { + std::cout << p << std::endl; + //if (volume(p) > lambda) + // goto step2; + for_all(n) + { + if (volume.domain().has(n) && deja_vu(n)) + { + //do_union(n, p); + P r = find_root(parent, n); + if (r != p) + { + // One cmpt less if + if (volume(r) != volume(p)) // r and p have differerent volumes + if (fused(p)) // p already belong to a cmpt (fused for an another n) + if (cmpts >= lambda) // union is still alowed + cmpts--; + + if (cmpts >= lambda || + volume(r) == volume(p) || + not fused(p)) + { + parent(r) = p; + // propagate set + fused(p) = true; + + //min_v(p) = min_v(r); //FIXME: fusion may happend with a non minima value + + fused(n) = true; // We cannot mark minima at init ! ... ? + + std::cout << "volume " << volume(p) << " - " << cmpts << std::endl; + debug::println(fused); + } + } + } + } + deja_vu(p) = true; + } + + I iota(ima.domain()); + debug::iota(iota); + +// step2: + std::cout << std::endl; + std::cout << "cmpts : " << cmpts << std::endl; + + // second pass + I output(ima.domain()); + { + mln_bkd_piter(S) p(sp); + for_all(p) + if (parent(p) == p) // p is root. + { + //FIXME: if minimas have same values. Components are not visible. + //Using min_v instead of ima does not really fix it. + //see propagation of min_v values. + //Maybe this is only a part of the problem: + // n_cmpt4 claims that n components remain, + // which is visually false. + output(p) = iota(p) * 10; //(p[0] + p[1]) * 10; + } + else + output(p) = output(parent(p)); + } + + return output; + } + + } // end of namespace n_cmpt + +# endif // ! MLN_INCLUDE_ONLY + +} // end of namespace mln + +#endif /* MLN_N_CMPT3_HH */ + Index: jardonnet/n_cmpt/Makefile --- jardonnet/n_cmpt/Makefile (revision 3027) +++ jardonnet/n_cmpt/Makefile (working copy) @@ -10,6 +10,9 @@ n_cmpt4: n_cmpt4.hh n_cmpt4.cc g++ -I../../.. -Wall -W -Wextra n_cmpt4.cc -DNDEBUG -O1 -o n_cmpt4 +n_cmpt5: n_cmpt5.hh n_cmpt5.cc + g++ -I../../.. -Wall -W -Wextra n_cmpt5.cc -DNDEBUG -O1 -o n_cmpt5 + debug: n_cmpt.hh n_cmpt.cc g++ -I../../.. -Wall -W -Wextra n_cmpt.cc -g -g3 -o n_cmpt @@ -19,6 +22,9 @@ debug3: n_cmpt3.hh n_cmpt3.cc g++ -I../../.. -Wall -W -Wextra n_cmpt3.cc -g -g3 -o n_cmpt3 -debug4: n_cmpt4.hh n_cmpt4.cc +Debug4: N_cmpt4.hh n_cmpt4.cc g++ -I../../.. -Wall -W -Wextra n_cmpt4.cc -g -g4 -o n_cmpt4 +Debug5: N_cmpt5.hh n_cmpt5.cc + g++ -I../../.. -Wall -W -Wextra n_cmpt5.cc -g -g5 -o n_cmpt5 + Index: jardonnet/TODO --- jardonnet/TODO (revision 3027) +++ jardonnet/TODO (working copy) @@ -4,30 +4,3 @@ - gaussian.cc: In function 'int main(int, char*)': gaussian.cc:22: error: no match for 'operator==' in 'img == out' -- - -Check gaussian - -- - - -adapt test for threshold (old thresholding) -- - - -- - -write -trans : vec --> quat - v |-> m = trans(t) - -- - -io/all.hh cass� - -- - -Mettre au clair center, mean ... - -- - - -algebra::to_point<P> ne devrait pas etre dans algebra puisqu'il - est utile pour passer d'un point<int> vers point<float> -move it in convert - -- - -ecrire cov.hh. quoi en argument (p_array, std::set, std::vector?) \ No newline at end of file